RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ZNF264O43296 627 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ITGA10O75578 1167 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 MED6O75586 246 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ZFAND5O76080 213 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 SNRPCP09234 159 aaKnown RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 VSIG10L2P0DP72 767 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 DCTDP32321 178 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 PSMB10P40306 273 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 NAA10P41227 235 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 DCAF7P61962 342 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 SURF2Q15527 256 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF468Q5VIY5 522 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 KDF1Q8NAX2 398 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 TMEM239Q8WW34 195 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ZMYND19Q96E35 227 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 RASL10BQ96S79 203 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 TCF7L1Q9HCS4 588 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 CPAMD8Q8IZJ3 1885 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 LOC102723996A0A087X1L8 192 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 GSTZ1O43708 216 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-201ENST00000340611 PPP1R3DO95685 299 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 AP3S2P59780 193 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 TOMM20Q15388 145 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 FCRLAQ7L513 359 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 IL22RA1Q8N6P7 574 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 FAM98AQ8NCA5 519 aaKnown RBP13.46□□□□□ -0.25
BRAT1-201ENST00000340611 DNAAF1Q8NEP3 725 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 OR10R2Q8NGX6 335 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 BRIX1Q8TDN6 353 aaKnown RBP13.46□□□□□ -0.25
BRAT1-201ENST00000340611 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 RIMS4Q9H426 269 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-201ENST00000340611 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 ATMQ13315 3056 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 ACOD1A6NK06 481 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 H7C1Q1 480 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 AGPAT2O15120 278 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 HCKP08631 526 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 MGMTP16455 207 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 DDTP30046 118 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 TAS2R43P59537 309 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 GAMTQ14353 236 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 GLT8D1Q68CQ7 371 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 VASH2Q86V25 355 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 TMEM200AQ86VY9 491 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 OR6V1Q8N148 313 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF563Q8TA94 476 aa13.46□□□□□ -0.25
BRAT1-201ENST00000340611 TMEM72A0PK05 275 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 PSMD9O00233 223 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 TXNDC12O95881 172 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 RPS15P62841 145 aaKnown RBP13.46□□□□□ -0.26
BRAT1-201ENST00000340611 FOXK1P85037 733 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 FAM69AQ5T7M9 428 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 UQCC3Q6UW78 93 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 RAB3CQ96E17 227 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 MOGAT1Q96PD6 335 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 ZNF559Q9BR84 538 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 FKRPQ9H9S5 495 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 CMC2Q9NRP2 79 aa13.46□□□□□ -0.26
BRAT1-201ENST00000340611 AP4M1O00189 453 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 ADAM10O14672 748 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 PPIHO43447 177 aaKnown RBP13.45□□□□□ -0.26
BRAT1-201ENST00000340611 EIF4E2O60573 245 aaKnown RBP13.45□□□□□ -0.26
BRAT1-201ENST00000340611 GNG10P50151 68 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 OR7A5Q15622 319 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 UBE2NLQ5JXB2 153 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 RPL13AP3Q6NVV1 102 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 PELI1Q96FA3 418 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 ZNF700Q9H0M5 742 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 P4HTMQ9NXG6 502 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 TAS2R5Q9NYW4 299 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 TRAV1-2A0A0B4J238 106 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 A0A1W2PPH5 198 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 RIIAD1A6NNX1 92 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 OPN1LWP04000 364 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 CD53P19397 219 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 OR8G1Q15617 311 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 ZPBPQ9BS86 351 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 PRDM13Q9H4Q3 707 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 NOX4Q9NPH5 578 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 UQCC1Q9NVA1 299 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 KLRF1Q9NZS2 232 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 VDAC3Q9Y277 283 aa13.45□□□□□ -0.26
BRAT1-201ENST00000340611 TRBV2A0A0J9YWF9 115 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 F5H0A9 414 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-201ENST00000340611 ARL6IP5O75915 188 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 CPN1P15169 458 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 SPINK2P20155 84 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 C1QL3Q5VWW1 255 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 PRRX2Q99811 253 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 SLITRK2Q9H156 845 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-201ENST00000340611 FAM212BQ9NTI7 297 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-201ENST00000340611 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 GNG8Q9UK08 70 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 A0A087WV48 116 aa13.44□□□□□ -0.26
BRAT1-201ENST00000340611 EDNRAP25101 427 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms