RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CDH20Q9HBT6 801 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 HHLA2Q9UM44 414 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 N6AMT1Q9Y5N5 214 aa8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 DIDO1Q9BTC0 2240 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-201ENST00000327028 IGHV1-18A0A0C4DH31 117 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 A0A1B0GTI1 187 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 A0A1B0GVI7 797 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 C5orf63A6NC05 138 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 NKX2-6A6NCS4 301 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF879B4DU55 563 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 ICMTO60725 284 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 CCNOP22674 350 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 MAPK3P27361 379 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 VBP1P61758 197 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 ZMAT1Q5H9K5 638 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 C22orf42Q6IC83 251 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 UNQ9370/PRO34162Q6UXP9 181 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 CEACAM19Q7Z692 300 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 PAQR4Q8N4S7 273 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 OR51E1Q8TCB6 317 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 PHYHIPQ92561 330 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 APOBEC3DQ96AK3 386 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 KCNS3Q9BQ31 491 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 C1QTNF6Q9BXI9 259 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 KCNJ16Q9NPI9 418 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF391Q9UJN7 358 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 GSTK1Q9Y2Q3 226 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 SMG1Q96Q15 3661 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 RTTNQ86VV8 2226 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 CHD6Q8TD26 2715 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 TRIM64BA6NI03 449 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 J3QW42 95 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 CECR9P0C854 216 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 WNT5AP41221 380 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 SORDQ00796 357 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 CDSNQ15517 529 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 DOK3Q7L591 496 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 KBTBD8Q8NFY9 601 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 OR51A4Q8NGJ6 313 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 TSEN15Q8WW01 171 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 KCTD7Q96MP8 289 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 RGCCQ9H4X1 137 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 RNF167Q9H6Y7 350 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 GPR84Q9NQS5 396 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 NPAP1Q9NZP6 1156 aa8.87□□□□□ -0.99
VIPAS39-201ENST00000327028 TRBV5-7A0A0A0MS05 114 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 XRCC2O43543 280 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 SYT7O43581 403 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 UCHL1P09936 223 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 OCM2P0CE71 109 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF83P51522 516 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 GFOD2Q3B7J2 385 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 GLYATL3Q5SZD4 288 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 XKRXQ6PP77 449 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 COMMD2Q86X83 199 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF808Q8N4W9 903 aaPredicted RBP8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 CCDC54Q8NEL0 328 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 NDNFQ8TB73 568 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ITLN2Q8WWU7 325 aaPredicted RBP8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 LYZL4Q96KX0 146 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 DERL3Q96Q80 235 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 TBCCD1Q9NVR7 557 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 DHDHQ9UQ10 334 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ZG16O60844 167 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ARL6IP5O75915 188 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ATE1O95260 518 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 THBDP07204 575 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF12P17014 697 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 TGFBR1P36897 503 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 SPCS2Q15005 226 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 Q6ZSR3 168 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 USP43Q70EL4 1123 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 OR13C3Q8NGS6 347 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 SPSB4Q96A44 273 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 SGK3Q96BR1 496 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 REEP6Q96HR9 211 aa8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 EIF3KQ9UBQ5 218 aaKnown RBP8.86□□□□□ -0.99
VIPAS39-201ENST00000327028 IGHV2OR16-5A0A0B4J2B6 119 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 LOC390937A0A1W2PQ73 354 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 H3BSH0 61 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 M0R1B8 84 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 SMPD2O60906 423 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 CLDN14O95500 239 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 RAF1P04049 648 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 CD2P06729 351 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 ZNF35P13682 527 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 PCSK6P29122 969 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 SOX2P48431 317 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 TFF3Q07654 80 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 C22orf34Q6ZV56 151 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 RFPL4BQ6ZWI9 263 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 OR2AE1Q8NHA4 323 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 AKAP1Q92667 903 aaKnown RBP eCLIP8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 OPA3Q9H6K4 179 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 NOX4Q9NPH5 578 aa8.85□□□□□ -0.99
VIPAS39-201ENST00000327028 PRR14LQ5THK1 2151 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms