RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OR8B4Q96RC9 309 aa14.38□□□□□ -0.11
USP42-201ENST00000306177 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
USP42-201ENST00000306177 PLK3Q9H4B4 646 aa14.38□□□□□ -0.11
USP42-201ENST00000306177 BHLHE40O14503 412 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 CD3DP04234 171 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 CLDN20P56880 219 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 ZNF468Q5VIY5 522 aaPredicted RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 NIPSNAP3BQ9BS92 247 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 QSER1Q2KHR3 1735 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 SDCBPO00560 298 aaPredicted RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 TAAR5O14804 337 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 SLC25A1P53007 311 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 PRAMEF5Q5TYX0 476 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 PRAMEF6Q5VXH4 476 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 C3orf49Q96BT1 292 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 FOXJ3Q9UPW0 622 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 KNTC1P50748 2209 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 FAM157BP0CG42 384 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 RAB5CP51148 216 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 INSM1Q01101 510 aaPredicted RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 SSBP1Q04837 148 aaKnown RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 HES1Q14469 280 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 CARFQ8N187 725 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 GPR32P1Q8NGA4 272 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 HIF1ANQ9NWT6 349 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 DNAJB12Q9NXW2 375 aaKnown RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 ATP23Q9Y6H3 246 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 ASCC3Q8N3C0 2202 aaKnown RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 RAB4AP20338 218 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 OPRM1P35372 400 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 AGFG1P52594 562 aaKnown RBP14.37□□□□□ -0.11
USP42-201ENST00000306177 FAAP20Q6NZ36 180 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 GCNT2Q8N0V5 402 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 OR4C3Q8NH37 302 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 HMGCLL1Q8TB92 370 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 HPSE2Q8WWQ2 592 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 BTF3L4Q96K17 158 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 PTDSS2Q9BVG9 487 aa14.37□□□□□ -0.11
USP42-201ENST00000306177 MN1Q10571 1320 aaPredicted RBP14.36□□□□□ -0.11
USP42-201ENST00000306177 XIRP1Q702N8 1843 aaKnown RBP14.36□□□□□ -0.11
USP42-201ENST00000306177 IGHV1OR15-9A0A0B4J2B8 117 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 C5orf67F2Z3F1 127 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 F6UZH7 168 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 PSMB3P49720 205 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 OR10K2Q6IF99 312 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 LFNGQ8NES3 379 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 MFRPQ9BY79 579 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ZNF816-ZNF321PA0A0X1KG74 233 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 MKRN2OSH3BPM6 223 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 SCAF4O95104 1147 aaKnown RBP14.36□□□□□ -0.11
USP42-201ENST00000306177 HRH1P35367 487 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 HAAOP46952 286 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 TESK1Q15569 626 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 CTF1Q16619 201 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 SLC25A35Q3KQZ1 300 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ST7LQ8TDW4 575 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ORAI1Q96D31 301 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 SRRQ9GZT4 340 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 AUNIPQ9H7T9 357 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 A0A1B0GUH1 482 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 RAB19A4D1S5 217 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 M0R1B8 84 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 MYBPHQ13203 477 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 CEACAM16Q2WEN9 425 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ZNF626Q68DY1 528 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 PRSS41Q7RTY9 318 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 GSX2Q9BZM3 304 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 LRP12Q9Y561 859 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 MGMTP16455 207 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ZNF718Q3SXZ3 478 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 SLC25A26Q70HW3 274 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 VN1R4Q7Z5H5 301 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ARHGEF39Q8N4T4 335 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 DERL3Q96Q80 235 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 ALKBH3Q96Q83 286 aaPredicted RBP14.36□□□□□ -0.11
USP42-201ENST00000306177 FAM173AQ9BQD7 235 aa14.36□□□□□ -0.11
USP42-201ENST00000306177 PURGQ9UJV8 347 aaKnown RBP14.36□□□□□ -0.11
USP42-201ENST00000306177 SNRPGP15A8MWD9 76 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 RAB27BO00194 218 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 WDR1O75083 606 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 DEFA4P12838 97 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 CDAP32320 146 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 THBS4P35443 961 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
USP42-201ENST00000306177 TIGD3Q6B0B8 471 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 ACOT7LQ6ZUV0 252 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 KCNRGQ8N5I3 272 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 FOXB1Q99853 325 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SLC23A1Q9UHI7 598 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 XRCC3O43542 346 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 PDGFAP04085 211 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 OR5H8P0DN80 308 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 NXPH1P58417 271 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms