RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 CCDC59Q9P031 241 aaKnown RBP18■□□□□ 0.47
PACSIN3-201ENST00000298838 TRAV1-2A0A0B4J238 106 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 SHISA3A0PJX4 238 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 PIN1P1O15428 100 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 CCL2P13500 99 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 CBR1P16152 277 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 IDH3GP51553 393 aaPredicted RBP18■□□□□ 0.47
PACSIN3-201ENST00000298838 TBC1D28Q2M2D7 210 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 TIMM23BQ5SRD1 257 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 STEAP2Q8NFT2 490 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 S100PBPQ96BU1 408 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 C1QTNF5Q9BXJ0 243 aa18■□□□□ 0.47
PACSIN3-201ENST00000298838 MOV10Q9HCE1 1003 aaKnown RBP18■□□□□ 0.47
PACSIN3-201ENST00000298838 TRBV5-7A0A0A0MS05 114 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 A0A1B0GTI1 187 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 IGKV3-15P01624 115 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 SRMP19623 302 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 CCL1P22362 96 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 DOK3Q7L591 496 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 FJX1Q86VR8 437 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 TPRA1Q86W33 373 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 SLC25A46Q96AG3 418 aa17.99■□□□□ 0.47
PACSIN3-201ENST00000298838 C5orf63A6NC05 138 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 IGLV3-1P01715 115 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 FAM27E3Q08E93 113 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 COLCA1Q6ZS62 124 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 FAM71F1Q96KD3 344 aaPredicted RBP17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 ACTR6Q9GZN1 396 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 SLITRK2Q9H156 845 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 TCF7L1Q9HCS4 588 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 COQ3Q9NZJ6 369 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 ZNF391Q9UJN7 358 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 AGFG2O95081 481 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 CELA3BP08861 270 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 CLEC2LP0C7M8 214 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 ZNF12P17014 697 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 CHRNB4P30926 498 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 RORCP51449 518 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 C1QTNF12Q5T7M4 302 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 GALNT11Q8NCW6 608 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 APOBEC3DQ96AK3 386 aaPredicted RBP17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 ORAI1Q96D31 301 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 USB1Q9BQ65 265 aaKnown RBP17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 RGCCQ9H4X1 137 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 ZNF275Q9NSD4 429 aaPredicted RBP17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 SLC25A15Q9Y619 301 aa17.98■□□□□ 0.47
PACSIN3-201ENST00000298838 A0A1B0GUH1 482 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 TLE1Q04724 770 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 FAM169BQ8N8A8 192 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 OR1J2Q8NGS2 313 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 SGK3Q96BR1 496 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 MUCL1Q96DR8 90 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 REEP6Q96HR9 211 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 LYZL4Q96KX0 146 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 SLIRPQ9GZT3 109 aaKnown RBP17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 CKLFQ9UBR5 152 aa17.97■□□□□ 0.47
PACSIN3-201ENST00000298838 SMIM30A4D0T7 59 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 C16orf97H3BN30 126 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 XRCC2O43543 280 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 MTRF1O75570 445 aaKnown RBP17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 DHRS3O75911 302 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 PAX7P23759 505 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 HNRNPA0Q13151 305 aaKnown RBP17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 ESPL1Q14674 2120 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 SLC25A35Q3KQZ1 300 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 MYPOPQ86VE0 399 aaPredicted RBP17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 PLPP7Q8NBV4 271 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 CCDC54Q8NEL0 328 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 OR2AE1Q8NHA4 323 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 C1QTNF6Q9BXI9 259 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 PLEKHA1Q9HB21 404 aa17.96■□□□□ 0.47
PACSIN3-201ENST00000298838 SMG1Q96Q15 3661 aaKnown RBP17.96■□□□□ 0.46
PACSIN3-201ENST00000298838 RAB3BP20337 219 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 GLYATL3Q5SZD4 288 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 PAQR4Q8N4S7 273 aaPredicted RBP17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 DACH2Q96NX9 599 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 TSC22D3Q99576 134 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 SOX7Q9BT81 388 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 CDH20Q9HBT6 801 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 CRNNQ9UBG3 495 aaPredicted RBP17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 IGLV1-44P01699 117 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 FSTP19883 344 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 CCKARP32238 428 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 ASCL1P50553 236 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 ADORA2A-AS1P86434 159 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 PPA1Q15181 289 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 TAB1Q15750 504 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 ZNF404Q494X3 552 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 PARP16Q8N5Y8 322 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 PRR7Q8TB68 274 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 AKAP1Q92667 903 aaKnown RBP eCLIP17.95■□□□□ 0.464e-11■■■■□ 22.8
PACSIN3-201ENST00000298838 FGGYQ96C11 551 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 CCDC120Q96HB5 630 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 BARHL1Q9BZE3 327 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 PMF1-BGLAPU3KQ54 211 aa17.95■□□□□ 0.46
PACSIN3-201ENST00000298838 TRAV8-7A0A075B6U6 113 aa17.94■□□□□ 0.46
PACSIN3-201ENST00000298838 LOC390937A0A1W2PQ73 354 aa17.94■□□□□ 0.46
PACSIN3-201ENST00000298838 J3QW42 95 aa17.94■□□□□ 0.46
PACSIN3-201ENST00000298838 PDCD5O14737 125 aa17.94■□□□□ 0.46
PACSIN3-201ENST00000298838 LMX1BO60663 402 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms