RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SPSB2Q99619 263 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 ST6GALNAC5Q9BVH7 336 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 IFT46Q9NQC8 304 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 AUP1Q9Y679 476 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 LOC105371267A0A1B0GV96 52 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 OR14I1A6ND48 311 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 PATE3B3GLJ2 98 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 DBHP09172 617 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 ZNF43P17038 809 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 MMP16P51512 607 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
SYDE2-201ENST00000234668 LUMP51884 338 aaPredicted RBP8.1□□□□□ -1.11
SYDE2-201ENST00000234668 GMFBP60983 142 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 IL13RA1P78552 427 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 WDR74Q6RFH5 385 aaPredicted RBP8.1□□□□□ -1.11
SYDE2-201ENST00000234668 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 ZBTB44Q8NCP5 570 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 BHLHE23Q8NDY6 225 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 OR4K17Q8NGC6 315 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 WNT2BQ93097 391 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 FN3KRPQ9HA64 309 aa8.1□□□□□ -1.11
SYDE2-201ENST00000234668 A0A1B0GTQ1 180 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 MEGF11A6BM72 1044 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 OR5H15A6NDH6 313 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 C5orf51A6NDU8 294 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 MPTX1A8MV57 137 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 SULT2B1O00204 365 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 SSX5O60225 188 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 RAD51DO75771 328 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ZFAND5O76080 213 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 STK17BO94768 372 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 IGHMP01871 453 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 IFNA6P05013 189 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 CFIP05156 583 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PATE4P0C8F1 98 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 CCL4P13236 92 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 RAB3AP20336 220 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 GK2Q14410 553 aaPredicted RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 SLC9A3R2Q15599 337 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PLAC9Q5JTB6 97 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 BATF2Q8N1L9 274 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 OR5D14Q8NGL3 314 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 MRPL13Q9BYD1 178 aaKnown RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 RAB22AQ9UL26 194 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 MRPS17Q9Y2R5 130 aaKnown RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 WIF1Q9Y5W5 379 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ZNF726A6NNF4 738 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 CRTAPO75718 401 aaPredicted RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PMS2P2O95744 297 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ZNF17P17021 662 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 GABREP78334 506 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 C1orf100Q5SVJ3 147 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ATRAIDQ6UW56 229 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 GALNTL5Q7Z4T8 443 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PRSS42Q7Z5A4 293 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 LYPD6Q86Y78 171 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 DNASE2BQ8WZ79 361 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 AQP3Q92482 292 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 RBM24Q9BX46 236 aaKnown RBP8.09□□□□□ -1.11
SYDE2-201ENST00000234668 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 B3GALT5Q9Y2C3 310 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 NBEAQ8NFP9 2946 aa8.09□□□□□ -1.11
SYDE2-201ENST00000234668 TPD52L2O43399 206 aaKnown RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 TRAF3IP2O43734 574 aaPredicted RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PDGFBP01127 241 aaPredicted RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 APOC3P02656 99 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 ISG15P05161 165 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PGA4P0DJD7 388 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PGA3P0DJD8 388 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PNLIPP16233 465 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 CX3CR1P49238 355 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 TMEM50BP56557 158 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 DHODHQ02127 395 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 ZP4Q12836 540 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 LPAL2Q16609 132 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PLXDC2Q6UX71 529 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 PPP1R3BQ86XI6 285 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 FOXRED2Q8IWF2 684 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 SLC22A24Q8N4F4 322 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 SPEM1Q8N4L4 309 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 OR1S1Q8NH92 325 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 CCDC107Q8WV48 283 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 NARS2Q96I59 477 aaKnown RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 ARHGAP5-AS1Q96IT6 56 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 VRK1Q99986 396 aaPredicted RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 ZNF416Q9BWM5 594 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 UPB1Q9UBR1 384 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 SRPK3Q9UPE1 567 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 MRPS28Q9Y2Q9 187 aaKnown RBP8.08□□□□□ -1.12
SYDE2-201ENST00000234668 CPAMD8Q8IZJ3 1885 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 LY6G6EA0A0G2JKS1 128 aa8.08□□□□□ -1.12
SYDE2-201ENST00000234668 MFSD2BA6NFX1 497 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms