RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Actl10A2AKE7 346 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rhox3gB9EJQ9 160 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr574F8VQ18 346 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn1r135K9J7G0 307 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Man2b2O54782 1018 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mtnd4lP03903 98 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 P04219 140 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 BpgmP15327 259 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Il1rnP25085 178 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 PrkcdP28867 674 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tac1P41539 130 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mfsd12Q3U481 476 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gpbp1Q6NXH3 473 aaKnown RBP8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Marveld1Q7TQJ1 173 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gatd1Q8BFQ8 220 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc17a8Q8BFU8 601 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rab39bQ8BHC1 213 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pi15Q8BS03 258 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ikzf5Q8BU00 419 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Lsm11Q8BUV6 361 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn1r84Q8R284 318 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mrps18cQ8R2L5 143 aaKnown RBP8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Seh1lQ8R2U0 360 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 0610009B22RikQ8R3W2 140 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr678Q8VG26 313 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gtpbp8Q9CY28 285 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ssu72Q9CY97 194 aaKnown RBP8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cmtm5Q9D6G9 156 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tlnrd1Q9ERE8 362 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gabrg1Q9R0Y8 465 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gsk3bQ9WV60 420 aa8.06□□□□□ -1.12
Upf3b-201ENSMUST00000076265 JcadQ5DTX6 1320 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Myh10Q61879 1976 aaKnown RBP8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zfp600A2A7V0 737 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1153A2AVC0 318 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zfp108E9Q8I5 642 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn2r62K7N712 859 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1360K9J6X0 313 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Irs3O54718 495 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 TymsP07607 307 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Csf2rbP26955 896 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pcsk4P29121 655 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Foxa1P35582 468 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Acvr1P37172 509 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Hist1h1dP43277 221 aaKnown RBP8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Resp18P47939 175 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Acrv1P50289 261 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rasl12Q08AT1 266 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc30a2Q2HJ10 371 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Klhl21Q3U410 597 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Atf7ip2Q3UL97 452 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 BC100530Q497J0 97 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Grxcr1Q50H32 290 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 PiglQ5SX19 252 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ewsr1Q61545 655 aaKnown RBP8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Dusp11Q6NXK5 321 aaKnown RBP8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1359Q7TQU5 313 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pak4Q8BTW9 593 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rap2cQ8BU31 183 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 MturnQ8CGA4 131 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cd226Q8K4F0 333 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1232Q8VEX7 311 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr722Q8VFC8 308 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vgll1Q99NC0 307 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Steap1Q9CWR7 339 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tmem50bQ9D1X9 158 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Hrct1Q9D6B9 109 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Uchl3Q9JKB1 230 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Nlrc5C3VPR6 1915 aa8.05□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Smok3cA0A087WSF2 504 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr396-ps1A0A0U1RNF5 211 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 4932443I19RikA0A286YE38 169 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm4141K9J7H2 306 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fpr-rs3O88537 343 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 P10404 641 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 BlkP16277 499 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Eci1P42125 289 aaKnown RBP8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 GlrbP48168 496 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rab8bP61028 207 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Siah2Q06986 325 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cpne9Q1RLL3 553 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc25a51Q5HZI9 298 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tnfsf15Q5UBV8 252 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Laptm4aQ60961 233 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zfp948Q6DFU8 667 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tmem151aQ6GQT5 468 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Smarcd3Q6P9Z1 483 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1299Q7TQX5 312 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 SynbQ8BI41 618 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mob3cQ8BJG4 216 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ssxb2Q8C5Z3 165 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Kct2Q8K201 259 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cops8Q8VBV7 209 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc44a3Q921V7 656 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 FrkQ922K9 512 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Spns3Q9D232 514 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gab1Q9QYY0 695 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ccdc166S4R181 449 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Dennd4aE9Q8V6 1869 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm266A6H634 200 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms