RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 P2ry4Q9JJS7 361 aa20.39■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Col6a6Q8C6K9 2265 aa20.39■□□□□ 0.85
Upf3a-201ENSMUST00000043767 1700025B11RikA0A087WNZ6 93 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Prr32A2AFE9 284 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Slc25a25A2ASZ8 469 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 C3ar1O09047 477 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Dpm1O70152 260 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Guca2aP33680 116 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 4930480E11RikQ0VG34 394 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Slc2a6Q3UDF0 497 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gm13757Q7TR17 305 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Xkr8Q8C0T0 401 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Serinc1Q9QZI8 453 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Syt8Q9R0N6 395 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r13G5E8I3 300 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Ms4a18J3QN01 344 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 OtpO09113 325 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Nme1P15532 152 aaKnown RBP20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Has2P70312 552 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 St3gal2Q11204 350 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Dus4lQ32M08 324 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Entpd6Q3U0P5 455 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 B3gnt6Q3USF0 391 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Fzd8Q61091 685 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Pea15Q62048 130 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Psmf1Q8BHL8 271 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Nsun3Q8CCT7 348 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Ttc36Q8VBW8 186 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr56Q8VGD6 315 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Tmem176bQ9R1Q6 263 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Zfp68Q9Z116 606 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Deaf1Q9Z1T5 566 aa20.38■□□□□ 0.85
Upf3a-201ENSMUST00000043767 2610044O15Rik8A0A087WRJ1 410 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr65A0A1B0GSF4 315 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Ankrd60A2AMD2 318 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Phf3B2RQG2 2025 aaKnown RBP20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r137D3YTY1 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r143E9PUW9 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r157E9Q069 297 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r139E9Q8L6 297 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r112G3UY48 297 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gm8888J3QPX5 126 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r135K9J7G0 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r125L7N227 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r116L7N2A6 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Kmt2bO08550 2713 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Tnfrsf17O88472 185 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Rac1P63001 192 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 CcnjQ3TZI6 379 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Fbxw20Q5U467 468 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Lrfn5Q8BXA0 719 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Thumpd1Q99J36 350 aaKnown RBP20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Emc6Q9CQW0 110 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Emc4Q9CZX9 183 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn1r100Q9EPS5 307 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gmeb1Q9JL60 562 aa20.37■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gm4779A0A1B0GR91 561 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Mrap2D3Z1Q2 207 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Vmn2r69G3XA45 850 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Cacng2O88602 323 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Irf1P15314 329 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Snrpd2P62317 118 aaKnown RBP20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr11Q60890 313 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 NppcQ61839 126 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Slc35f2Q7TML3 375 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Entpd8Q8K0L2 497 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr98Q8VFD9 309 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Pdzk1ip1Q9CQH0 114 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Tanc2A2A690 1994 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Msl3l2G3X992 371 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 MfngO09008 321 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Aqp8P56404 261 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Eif4eP63073 217 aaKnown RBP20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Cpeb1P70166 561 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Clcn4Q61418 747 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Pgm2Q7TSV4 620 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 GskipQ8BGR8 139 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Slc1a7Q8JZR4 559 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Slc25a42Q8R0Y8 318 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr1043Q8VFK4 314 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 WacQ924H7 646 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gdpd1Q9CRY7 314 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Steap1Q9CWR7 339 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Tsga8Q9JJL0 238 aa20.36■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr1315-ps1A0A140LI66 314 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Igh-1aP01865 398 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr776Q7TRI3 312 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Pck2Q8BH04 640 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr54Q8VFE6 313 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Olfr1316Q8VG12 314 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 FtmtQ9D5H4 237 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Pfn4Q9D6I3 129 aa20.35■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gm21149A0A0G2JFY7 255 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Klhl15A2AAX3 604 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Awat1A2ADU9 328 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Tmem92B7ZWI3 162 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Adamts3E9Q287 1204 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 Gpr31F8VQN3 319 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 GifP52787 417 aa20.34■□□□□ 0.85
Upf3a-201ENSMUST00000043767 PilraQ2YFS3 302 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms