RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 PSMA2P25787 234 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 AKT2P31751 481 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 TALDO1P37837 337 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 HTR2BP41595 481 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 RAD52P43351 418 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 PLA2G16P53816 162 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 IRF8Q02556 426 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 CD164Q04900 197 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 CHIT1Q13231 466 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 RCN2Q14257 317 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 EXOC3L2Q2M3D2 409 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 MLIPQ5VWP3 458 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 C22orf42Q6IC83 251 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 CLDN19Q8N6F1 224 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 DQX1Q8TE96 717 aaKnown RBP-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 SH3YL1Q96HL8 342 aaPredicted RBP-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 PPP1R36Q96LQ0 422 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 VPS35Q96QK1 796 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 MS4A8Q9BY19 250 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 FAM60AQ9NP50 221 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 SMOXQ9NWM0 555 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 CFDP1Q9UEE9 299 aaPredicted RBP-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 VAX2Q9UIW0 290 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 GSTK1Q9Y2Q3 226 aa-1.48□□□□□ -2.65
LMBR1-222ENST00000638959 CUX2O14529 1486 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 IGHV2-5P01817 119 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 FGF1P05230 155 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 PABPC4LP0CB38 370 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 RRASP10301 218 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 KRT20P35900 424 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 ATP5C1P36542 298 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 RPS15AP62244 130 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 RPS15P62841 145 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 YWHAHQ04917 246 aaPredicted RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 MXD1Q05195 221 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 GANABQ14697 944 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 SURF2Q15527 256 aaPredicted RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 SPIN4Q56A73 249 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 CYHR1Q6ZMK1 362 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 OTUD6AQ7L8S5 288 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 MDP1Q86V88 176 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 LRRC8AQ8IWT6 810 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 OR10G6Q8NH81 332 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 MFSD8Q8NHS3 518 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 EEF1AKMT3Q96AZ1 226 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 EFHD2Q96C19 240 aaPredicted RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 HSFY1Q96LI6 401 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 CLCC1Q96S66 551 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 PEBP4Q96S96 227 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 SECISBP2Q96T21 854 aaKnown RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 EDEM3Q9BZQ6 932 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 SLC5A7Q9GZV3 580 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 FANCEQ9HB96 536 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 PDP1Q9P0J1 537 aaPredicted RBP-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 CES1P1Q9UKY3 287 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 RAB22AQ9UL26 194 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 ST3GAL6Q9Y274 331 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 TNXBP22105 4242 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 ABCC4O15439 1325 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 KDRP35968 1356 aa-1.49□□□□□ -2.65
LMBR1-222ENST00000638959 ISPDA4D126 451 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 LRP5LA4QPB2 252 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 ZNF729A6NN14 1252 aaPredicted RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 MRPS14O60783 128 aaKnown RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 CXCL10P02778 98 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TRGV3P03979 118 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 HMGB2P26583 209 aaKnown RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 RBM34P42696 430 aaKnown RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 QARSP47897 775 aaKnown RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 P2RY1P47900 373 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 KIAA1024LP59773 190 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TWF1Q12792 350 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TRIP10Q15642 601 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 FILIP1LQ4L180 1135 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TIMM23BQ5SRD1 257 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 KCNIP4Q6PIL6 250 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 CNSTQ6PJW8 725 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 ECHDC2Q86YB7 292 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 SLC25A29Q8N8R3 303 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 ZNF439Q8NDP4 499 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 ITLN2Q8WWU7 325 aaPredicted RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 APOBEC3DQ96AK3 386 aaPredicted RBP-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TMEM243Q9BU79 118 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 TMEM27Q9HBJ8 222 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 UBQLN4Q9NRR5 601 aa-1.5□□□□□ -2.65
LMBR1-222ENST00000638959 IGHV1-69DA0A0B4J2H0 117 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 ARRDC5A6NEK1 342 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 A8MUN3 132 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 CLDN5O00501 218 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 SDHDO14521 159 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 TRAPPC3O43617 180 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 DPM1O60762 260 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 ATP1B2P14415 290 aaPredicted RBP-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 KITLGP21583 273 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 PSMB9P28065 219 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 IL12BP29460 328 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 CFHR2P36980 270 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 YAP1P46937 504 aaKnown RBP-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 CDK5R1Q15078 307 aa-1.51□□□□□ -2.65
LMBR1-222ENST00000638959 QPRTQ15274 297 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms