RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DSCR9P59020 149 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 GRB2P62993 217 aaKnown RBP9.46□□□□□ -0.9
LIG1-211ENST00000596457 TRIP10Q15642 601 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 PCK2Q16822 640 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 AADACL4Q5VUY2 407 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 NXNL2Q5VZ03 156 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 LRRN1Q6UXK5 716 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 USP51Q70EK9 711 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 KRT77Q7Z794 578 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 GID4Q8IVV7 300 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 BHLHE23Q8NDY6 225 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 OTOSQ8NHW6 89 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 HAVCR1Q96D42 359 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 MBOAT4Q96T53 435 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 MDFIQ99750 246 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 SMR3AQ99954 134 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 PIMREGQ9BSJ6 248 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 C1QTNF5Q9BXJ0 243 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 GSX1Q9H4S2 264 aaPredicted RBP9.46□□□□□ -0.9
LIG1-211ENST00000596457 TREM2Q9NZC2 230 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 AASSQ9UDR5 926 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 KLHDC2Q9Y2U9 406 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 C5orf63A6NC05 138 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ZSCAN5BA6NJL1 495 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 SLC22A31A6NKX4 558 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 H3BSA7 217 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 NCR1O76036 304 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 APOL3O95236 402 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 IGHV1-46P01743 117 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 CSF3P09919 207 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 RAC2P15153 192 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 TUBG1P23258 451 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ATP6V1E1P36543 226 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 MMP15P51511 669 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ELF3P78545 371 aaPredicted RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 EFNB1P98172 346 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 GGTLC2Q14390 218 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 GFOD2Q3B7J2 385 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 KRTAP27-1Q3LI81 207 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 DRAM2Q6UX65 266 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 FAM57BQ71RH2 274 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 MRPL21Q7Z2W9 205 aaKnown RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 SLC35F2Q8IXU6 374 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ZNF555Q8NEP9 628 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 OR2Z1Q8NG97 314 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 OR51G2Q8NGK0 314 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 OR8J1Q8NGP2 316 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 C10orf105Q8TEF2 133 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 RNF133Q8WVZ7 376 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 PGAM5Q96HS1 289 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 HRASLS5Q96KN8 279 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 ZNF582Q96NG8 517 aaPredicted RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 TBX5Q99593 518 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 YIPF3Q9GZM5 350 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 CYSLTR2Q9NS75 346 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 DDX28Q9NUL7 540 aaKnown RBP9.45□□□□□ -0.9
LIG1-211ENST00000596457 RTTNQ86VV8 2226 aa9.45□□□□□ -0.9
LIG1-211ENST00000596457 LOC390937A0A1W2PQ73 354 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 GGT3PA6NGU5 568 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 ZNF670-ZNF695F2Z2N8 137 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 J3QW42 95 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 MAGEB4O15481 346 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 SLC25A16P16260 332 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 KITLGP21583 273 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 ANOS1P23352 680 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 LIPAP38571 399 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 OPRL1P41146 370 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 ZNF121P58317 390 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 TNFAIP6P98066 277 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 GK2Q14410 553 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 TIGD6Q17RP2 521 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 PCGF3Q3KNV8 242 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 GLYATL3Q5SZD4 288 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 KCTD18Q6PI47 426 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 CLEC9AQ6UXN8 241 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 FBXW12Q6X9E4 464 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 DNM1P46Q6ZS02 220 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 PGAP1Q75T13 922 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 SPRYD4Q8WW59 207 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 RDH5Q92781 318 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 YIPF5Q969M3 257 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 MYOZ1Q9NP98 299 aaPredicted RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
LIG1-211ENST00000596457 IKZF2Q9UKS7 526 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 GTF2A1LQ9UNN4 478 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 COPS3Q9UNS2 423 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 LRP12Q9Y561 859 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 PLCE1Q9P212 2302 aa9.44□□□□□ -0.9
LIG1-211ENST00000596457 CR1P17927 2039 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 H0YL77 283 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 ENTPD6O75354 484 aa9.43□□□□□ -0.9
LIG1-211ENST00000596457 APOC1P02654 83 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms