RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 LYZL6O75951 148 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 CD8BP10966 210 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 SLC2A2P11168 524 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-212ENST00000591126 ERHP84090 104 aaKnown RBP5.61□□□□□ -1.51
SMAD4-212ENST00000591126 FAM74A1Q5RGS3 127 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 ETFRF1Q6IPR1 90 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 FNDC9Q8TBE3 224 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 CCL17Q92583 94 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 TAAR6Q96RI8 345 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 C1QTNF6Q9BXI9 259 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 CHST6Q9GZX3 395 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 TRIOBPQ9H2D6 2365 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 ADAM20O43506 726 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 TUSC2O75896 110 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 EML2O95834 649 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 IGHV3-9P01782 118 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 CA7P43166 264 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 SNU13P55769 128 aaKnown RBP5.61□□□□□ -1.51
SMAD4-212ENST00000591126 SSX2Q16385 188 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 MEP1BQ16820 701 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 C17orf107Q6ZR85 190 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 Q6ZS92 163 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 CDH24Q86UP0 819 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 FOXRED2Q8IWF2 684 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 ADGRG5Q8IZF4 528 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 Q8N402 240 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 DMBX1Q8NFW5 382 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF285Q96NJ3 590 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 SLC25A31Q9H0C2 315 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 MED28Q9H204 178 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 UBQLN3Q9H347 655 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 GPR35Q9HC97 309 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 COMMD3Q9UBI1 195 aa5.61□□□□□ -1.51
SMAD4-212ENST00000591126 GDF2Q9UK05 429 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-212ENST00000591126 K7EQM0 130 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GAPDHSO14556 408 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MAS1P04201 325 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MTNR1BP49286 362 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GSK3AP49840 483 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 RRAS2P62070 204 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 Q6ZT83 130 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MFSD4AQ8N468 514 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ARHGEF39Q8N4T4 335 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 FAM156AQ8NDB6 213 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 OR10J5Q8NHC4 309 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF420Q8TAQ5 688 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MGLLQ99685 303 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 RASL11BQ9BPW5 248 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 UNKLQ9H9P5 680 aaKnown RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GALNT9Q9HCQ5 603 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 YAE1D1Q9NRH1 226 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 CBLN4Q9NTU7 201 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 NECAP2Q9NVZ3 263 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 BEX4Q9NWD9 120 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 SIPA1L1O43166 1804 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 RALGAPA2Q2PPJ7 1873 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 SEMA7AO75326 666 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 FOSL1P15407 271 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 HTR2CP28335 458 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GPR12P47775 334 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 EMDP50402 254 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 RGS21Q2M5E4 152 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GTDC1Q4AE62 458 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 SLC22A6Q4U2R8 563 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 LHFPL3Q86UP9 236 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 PLPPR2Q96GM1 343 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 NMNAT3Q96T66 252 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MMP27Q9H306 513 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 PLEKHA3Q9HB20 300 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 HRASLSQ9HDD0 168 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 B9D1Q9UPM9 204 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 NEU3Q9UQ49 428 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MRPS18BQ9Y676 258 aaKnown RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 C17orf112F2Z3M2 114 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 SLC16A6O15403 523 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 TXNL1O43396 289 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 PIP5K1CO60331 668 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 HRASP01112 189 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ATF1P18846 271 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GZMHP20718 246 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 SERPINA2P20848 420 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GATA3P23771 443 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MSX2P35548 267 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 MLLT11Q13015 90 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 P2RY14Q15391 338 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF239Q16600 458 aaKnown RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 GPR107Q5VW38 600 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 CYB5R2Q6BCY4 276 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 STX12Q86Y82 276 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 NFAM1Q8NET5 270 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-212ENST00000591126 OR2T11Q8NH01 316 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 TAMM41Q96BW9 452 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 IMMP1LQ96LU5 166 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 PARD6AQ9NPB6 346 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ISYNA1Q9NPH2 558 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 ASF1BQ9NVP2 202 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 FKBP14Q9NWM8 211 aa5.6□□□□□ -1.51
SMAD4-212ENST00000591126 KIF25Q9UIL4 384 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms