RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 STRADAQ7RTN6 431 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 ZNF547Q8IVP9 402 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 FAM58AQ8N1B3 248 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 FAM71E2Q8N5Q1 922 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 OR8K3Q8NH51 312 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 OR4S2Q8NH73 311 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 ITFG1Q8TB96 612 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 RDH5Q92781 318 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 TMEM230Q96A57 120 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 TMEM175Q9BSA9 504 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 NAA50Q9GZZ1 169 aaKnown RBP3.78□□□□□ -1.8
TUBD1-208ENST00000588009 IFNKQ9P0W0 207 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 ZNF225Q9UK10 706 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 TP53TG5Q9Y2B4 290 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 KPTNQ9Y664 436 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 GPR179Q6PRD1 2367 aa3.78□□□□□ -1.8
TUBD1-208ENST00000588009 PLCH1Q4KWH8 1693 aa3.78□□□□□ -1.81
TUBD1-208ENST00000588009 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 EYSQ5T1H1 3165 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ARHGAP5Q13017 1502 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 SLC22A20A6NK97 555 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 M0QX08 132 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 SUPT3HO75486 399 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 TDP2O95551 362 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 TACSTD2P09758 323 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 RHOXF2BP0C7M4 288 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ZDHHC11BP0C7U3 371 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ATF6P18850 670 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 RAB3BP20337 219 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 RAB4AP20338 218 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 CSNK1DP48730 415 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 HADHBP55084 474 aaKnown RBP3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ATP6V0D1P61421 351 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 SLC7A9P82251 487 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 NDPQ00604 133 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 TCP10Q12799 353 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 PSG5Q15238 335 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 FAM83EQ2M2I3 478 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ASCL4Q6XD76 172 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 LINC00336Q6ZUF6 198 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 STPG2Q8N412 459 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 OR52E2Q8NGJ4 325 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 TCP10LQ8TDR4 215 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 APH1BQ8WW43 257 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 C19orf60Q96EN9 201 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 PHYHIPLQ96FC7 376 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 NRTNQ99748 197 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 RHOXF2Q9BQY4 288 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 NANOGQ9H9S0 305 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 PATZ1Q9HBE1 687 aaKnown RBP3.77□□□□□ -1.81
TUBD1-208ENST00000588009 ZNF282Q9UDV7 671 aaPredicted RBP3.77□□□□□ -1.81
TUBD1-208ENST00000588009 FLVCR2Q9UPI3 526 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 THSD7AQ9UPZ6 1657 aa3.77□□□□□ -1.81
TUBD1-208ENST00000588009 CHD2O14647 1828 aaKnown RBP3.77□□□□□ -1.81
TUBD1-208ENST00000588009 PIK3R4Q99570 1358 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 ZNFX1Q9P2E3 1918 aaKnown RBP3.76□□□□□ -1.81
TUBD1-208ENST00000588009 CHD6Q8TD26 2715 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 COL2A1P02458 1487 aaPredicted RBP3.76□□□□□ -1.81
TUBD1-208ENST00000588009 LINC00854A0A1B0GVQ3 168 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 A6NDN8 102 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 NME4O00746 187 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 NEMFO60524 1076 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 IGLV2-23P01705 113 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 HOXB8P17481 243 aaPredicted RBP3.76□□□□□ -1.81
TUBD1-208ENST00000588009 CDKN2BP42772 138 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 NMUP48645 174 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 TAF6P49848 677 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 STK11Q15831 433 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 ZNF79Q15937 498 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 TMEM183BQ1AE95 376 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 THEM4Q5T1C6 240 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 FBXL22Q6P050 247 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 TMEM183AQ8IXX5 376 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 KIF2BQ8N4N8 673 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 NPWQ8N729 165 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 OR13C9Q8NGT0 318 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 RPEQ96AT9 228 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 CREB3L1Q96BA8 519 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 DYNLL2Q96FJ2 89 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 CALN1Q9BXU9 219 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 MCUBQ9NWR8 336 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 ZMAT5Q9UDW3 170 aaKnown RBP3.76□□□□□ -1.81
TUBD1-208ENST00000588009 TMEM2Q9UHN6 1383 aa3.76□□□□□ -1.81
TUBD1-208ENST00000588009 LTBP1Q14766 1721 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 MYO5CQ9NQX4 1742 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 NWD2Q9ULI1 1742 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 GAKO14976 1311 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 TOPAZ1Q8N9V7 1692 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 TNRC6CQ9HCJ0 1690 aaKnown RBP3.75□□□□□ -1.81
TUBD1-208ENST00000588009 ZNF646O15015 1829 aaPredicted RBP3.75□□□□□ -1.81
TUBD1-208ENST00000588009 PLAC8L1A1L4L8 177 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 CENPXA8MT69 81 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 NVLO15381 856 aaKnown RBP3.75□□□□□ -1.81
TUBD1-208ENST00000588009 ERI3O43414 337 aaKnown RBP3.75□□□□□ -1.81
TUBD1-208ENST00000588009 SLC19A2O60779 497 aa3.75□□□□□ -1.81
TUBD1-208ENST00000588009 PAHP00439 452 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms