RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 SLC30A7Q8NEW0 376 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 MUCL1Q96DR8 90 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 PGAM5Q96HS1 289 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 COMMD4Q9H0A8 199 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 RBM38Q9H0Z9 239 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 MOB1AQ9H8S9 216 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 KCNJ16Q9NPI9 418 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 NDUFA13Q9P0J0 144 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 CRNNQ9UBG3 495 aaPredicted RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 NUFIP1Q9UHK0 495 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 ENPP5Q9UJA9 477 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 SMG1Q96Q15 3661 aaKnown RBP12.04□□□□□ -0.48
TSEN54-206ENST00000579449 HCFC1P51610 2035 aa12.04□□□□□ -0.48
TSEN54-206ENST00000579449 SMIM31A0A1B0GVY4 71 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 IGKV3-15P01624 115 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 IGLV1-44P01699 117 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 TTRP02766 147 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 NR4A1P22736 598 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 PSMA1P25786 263 aaKnown RBP12.03□□□□□ -0.48
TSEN54-206ENST00000579449 TBC1D28Q2M2D7 210 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 XKRXQ6PP77 449 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 SLC16A12Q6ZSM3 486 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 C22orf34Q6ZV56 151 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 RDH10Q8IZV5 341 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 FAM169BQ8N8A8 192 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 ITLN2Q8WWU7 325 aaPredicted RBP12.03□□□□□ -0.48
TSEN54-206ENST00000579449 RPL3LQ92901 407 aaKnown RBP12.03□□□□□ -0.48
TSEN54-206ENST00000579449 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 DCLRE1CQ96SD1 692 aaKnown RBP12.03□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 STUB1Q9UNE7 303 aa12.03□□□□□ -0.48
TSEN54-206ENST00000579449 P2RY10O00398 339 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 TBX1O43435 398 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 AIREO43918 545 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 GPX5O75715 221 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 LCATP04180 440 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 CECR9P0C854 216 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 AGAP20933 346 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 PAX7P23759 505 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF83P51522 516 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 RPS11P62280 158 aaKnown RBP eCLIP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 FABP5Q01469 135 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 INSL4Q14641 139 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 TRAM1Q15629 374 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 SNAI3Q3KNW1 292 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF704Q6ZNC4 412 aaPredicted RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 PAQR4Q8N4S7 273 aaPredicted RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF808Q8N4W9 903 aaPredicted RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 MS4A15Q8N5U1 240 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 OR1J2Q8NGS2 313 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 ABHD4Q8TB40 342 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 RGP1Q92546 391 aaPredicted RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 ISOC1Q96CN7 298 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 SP140LQ9H930 580 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 CDH20Q9HBT6 801 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 MOV10Q9HCE1 1003 aaKnown RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 EXOSC4Q9NPD3 245 aaKnown RBP12.02□□□□□ -0.49
TSEN54-206ENST00000579449 NPAP1Q9NZP6 1156 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 SSR3Q9UNL2 185 aa12.02□□□□□ -0.49
TSEN54-206ENST00000579449 IGHV1-18A0A0C4DH31 117 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 LOC100506127A0A0U1RQW1 187 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 LOC107986453A0A1B0GWG9 222 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TRDV1A0A1B0GX56 115 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 H3BSH0 61 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 M0R1B8 84 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 GABRPO00591 440 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
TSEN54-206ENST00000579449 GABARAPO95166 117 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 HLA-DPB1P04440 258 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 THBDP07204 575 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 UBCP0CG48 685 aaKnown RBP12.01□□□□□ -0.49
TSEN54-206ENST00000579449 PPP3CBP16298 524 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 ACHEP22303 614 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 GRNP28799 593 aaKnown RBP12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TMBIM6P55061 237 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 LSM3P62310 102 aaKnown RBP12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TFF3Q07654 80 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 CTF1Q16619 201 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TMEM244Q5VVB8 128 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 CD200R1LQ6Q8B3 271 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 TMEM91Q6ZNR0 172 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 COLCA1Q6ZS62 124 aa12.01□□□□□ -0.49
TSEN54-206ENST00000579449 OR10AC1Q8NH08 325 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms