RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 MZT2AQ6P582 158 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 SLC25A47Q6Q0C1 308 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 PRSS57Q6UWY2 283 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 LRRN1Q6UXK5 716 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 DCXRQ7Z4W1 244 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 C11orf40Q8WZ69 217 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 TMEM54Q969K7 222 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ADGRG7Q96K78 797 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ABHD6Q9BV23 337 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 SFXN3Q9BWM7 321 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 C1orf198Q9H425 327 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ELOVL3Q9HB03 270 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 MRPL22Q9NWU5 206 aaKnown RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 SLCO1C1Q9NYB5 712 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 KLHDC2Q9Y2U9 406 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 IQCMA0A1B0GVH7 501 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 A8MXE2 369 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 H0YC42 278 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 SIAH2O43255 324 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 DHHO43323 396 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 CYTIPO60759 359 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 MRPL33O75394 65 aaKnown RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 FCGR2AP12318 317 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 MSR1P21757 451 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 HSD11B1P28845 292 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 LHX2P50458 406 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 CCR9P51686 369 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 ZNF45Q02386 682 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 HNRNPA0Q13151 305 aaKnown RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 RNPS1Q15287 305 aaKnown RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 KCNMB1Q16558 191 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 SGCAQ16586 387 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 PCK2Q16822 640 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 HSD17B12Q53GQ0 312 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 ZMAT1Q5H9K5 638 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 C10orf128Q5T292 105 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 P4HA3Q7Z4N8 544 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 CNEP1R1Q8N9A8 125 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 ACOT12Q8WYK0 555 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 ROBO4Q8WZ75 1007 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 KCNS3Q9BQ31 491 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 NXF2Q9GZY0 626 aaKnown RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 PIGMQ9H3S5 423 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 NIPAL2Q9H841 368 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 PALMDQ9NP74 551 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 CENPMQ9NSP4 180 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 ADAM30Q9UKF2 790 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 FLVCR1Q9Y5Y0 555 aa8.9□□□□□ -0.98
SS18-210ENST00000578700 SIRT4Q9Y6E7 314 aaPredicted RBP8.9□□□□□ -0.98
SS18-210ENST00000578700 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 ZNF716A6NP11 495 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 LOC110117498-PIK3R3F6TDL0 507 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CRLF1O75462 422 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 UPK3AO75631 287 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 MPZL1O95297 269 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 APOC1P02654 83 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CD2P06729 351 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 OCM2P0CE71 109 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CPN1P15169 458 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 NPR2P20594 1047 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 DCTDP32321 178 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 OPRL1P41146 370 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 RPS27P42677 84 aaKnown RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 PTH2RP49190 550 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 BMXP51813 675 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CLDN18P56856 261 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 Q499Y3 187 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 DDI2Q5TDH0 399 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 OR7E24Q6IFN5 339 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 FDX2Q6P4F2 183 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 ZNF704Q6ZNC4 412 aaPredicted RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 SPATC1Q76KD6 591 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 RHOUQ7L0Q8 258 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 LINC00346Q8IVM7 164 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 OR2G2Q8NGZ5 317 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 GPR148Q8TDV2 347 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 RNF128Q8TEB7 428 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 TSEN15Q8WW01 171 aaKnown RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 WNT2BQ93097 391 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 TMEM45BQ96B21 275 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 SLAMF6Q96DU3 332 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 TRMT61AQ96FX7 289 aaKnown RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 PGLYRP3Q96LB9 341 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 ZNF385AQ96PM9 386 aaKnown RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 NELFAQ9H3P2 528 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 SMURF1Q9HCE7 757 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 POLE4Q9NR33 117 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CKLFQ9UBR5 152 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 CYB5R1Q9UHQ9 305 aa8.89□□□□□ -0.99
SS18-210ENST00000578700 ING1Q9UK53 422 aaPredicted RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 NOSIPQ9Y314 301 aaKnown RBP8.89□□□□□ -0.99
SS18-210ENST00000578700 LRP12Q9Y561 859 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms