RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LHX4Q969G2 390 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF845Q96IR2 970 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 CST4P01036 141 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 SNCAP37840 140 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 EMDP50402 254 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 C21orf62-AS1Q17RA5 79 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 C5orf46Q6UWT4 87 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC38A9Q8NBW4 561 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 CMBLQ96DG6 245 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLAMF6Q96DU3 332 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ACAD8Q9UKU7 415 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1B0GTH9 108 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 GJE1A6NN92 205 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 CFDP00746 253 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 CD96P40200 585 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 DEFB103AP81534 67 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ECH1Q13011 328 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR8U1Q8NH10 309 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 EDAQ92838 391 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 EID2BQ96D98 161 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 RAB27BO00194 218 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 CDC42EP2O14613 210 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 PAX6P26367 422 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 THSD4Q6ZMP0 1018 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR13D1Q8NGV5 346 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 INTS12Q96CB8 462 aaKnown RBP11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 TPSD1Q9BZJ3 242 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 TRAPPC2LQ9UL33 140 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 SCN1AP35498 2009 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF816-ZNF321PA0A0X1KG74 233 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 MBTPS2O43462 519 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 TUSC2O75896 110 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 C1QCP02747 245 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 NMBP08949 121 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ABCD3P28288 659 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF321PQ8N8H1 164 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 LYRM4Q9HD34 91 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 MBNL1Q9NR56 388 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 DNMT3BQ9UBC3 853 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 V9GYS6 101 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 C20orf202A1L168 122 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 CTAG2O75638 210 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 RAB32Q13637 225 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRTGQ2VWP7 1150 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 DEFB133Q30KQ1 61 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM209BQ5JX69 171 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ANKRD16Q6P6B7 361 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMPRSS11FQ6ZWK6 438 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 VN1R2Q8NFZ6 395 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 RTN4IP1Q8WWV3 396 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRRX2Q99811 253 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 GHITMQ9H3K2 345 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 F5P12259 2224 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 AKR7A3O95154 331 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 PIGPP57054 158 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 TLE1Q04724 770 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 H1FNTQ75WM6 255 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 C19orf47Q8N9M1 422 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR4F5Q8NH21 305 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 HHIPQ96QV1 700 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR4F4Q96R69 305 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 CA10Q9NS85 328 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 HAO2Q9NYQ3 351 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A087X0M5 115 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1B0GX30 115 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ABLIM3O94929 683 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 GZMMP51124 257 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 ELAVL1Q15717 326 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 INPP5JQ15735 1006 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 PCK2Q16822 640 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 COL13A1Q5TAT6 717 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 DOK3Q7L591 496 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM103A1Q9BTL3 118 aaKnown RBP11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR51I2Q9H344 312 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 KCND3Q9UK17 655 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC5A6Q9Y289 635 aa11.23□□□□□ -0.61
CSPG4P13-202ENST00000567704 RP1L1Q8IWN7 2480 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms