RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PIGVQ9NUD9 493 aa8.43□□□□□ -1.06
CDH1-205ENST00000562836 ZNF319Q9P2F9 582 aa8.43□□□□□ -1.06
CDH1-205ENST00000562836 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
CDH1-205ENST00000562836 A0A1W2PRS3 328 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 SLC38A8A6NNN8 435 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 C9JVG2 144 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 SDHDO14521 159 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 MT-ND4P03905 459 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ADRA2AP08913 450 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 OR5H8P0DN80 308 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 GDF1P27539 372 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 FRKP42685 505 aaPredicted RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 GYG1P46976 350 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 CAV2P51636 162 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 RPL23AP62750 156 aaKnown RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 IL13RA1P78552 427 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 EFNB1P98172 346 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ACVR1Q04771 509 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 NSDHLQ15738 373 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 NKPD1Q17RQ9 610 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 CPTPQ5TA50 214 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 AADACL3Q5VUY0 350 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 SLC8B1Q6J4K2 584 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ZNF730Q6ZMV8 503 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ZNF788Q6ZQV5 615 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 C19orf35Q6ZS72 473 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 COX15Q7KZN9 410 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 PELI3Q8N2H9 469 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 OR1J1Q8NGS3 322 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ZNF519Q8TB69 540 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 NEU4Q8WWR8 484 aaPredicted RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 KIRREL1Q96J84 757 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 EPYCQ99645 322 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 PDCD2LQ9BRP1 358 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 GPR27Q9NS67 375 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 PCYT1BQ9Y5K3 369 aaPredicted RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 SCN7AQ01118 1682 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 NKX2-6A6NCS4 301 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 A6NIN4 97 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 IFNL4K9M1U5 179 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 TNFSF13O75888 250 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 VIPP01282 170 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 CD58P19256 250 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 MMP11P24347 488 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 ITGB7P26010 798 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 GABRA4P48169 554 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 GNG3P63215 75 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 SLC6A3Q01959 620 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 PTGES3Q15185 160 aaKnown RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 ZXDCQ2QGD7 858 aaPredicted RBP8.42□□□□□ -1.06
CDH1-205ENST00000562836 RAB6CQ53S08 254 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 TMEM240Q5SV17 173 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 CD300LDQ6UXZ3 194 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 TNFRSF13CQ96RJ3 184 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 RSG1Q9BU20 258 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 RAB6CQ9H0N0 254 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 GPR35Q9HC97 309 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 TBX21Q9UL17 535 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 LAMB2P55268 1798 aa8.42□□□□□ -1.06
CDH1-205ENST00000562836 C3orf70A6NLC5 250 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 FAM227AF5H4B4 570 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 FXYD1O00168 92 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 LEFTY2O00292 366 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 P2RY10O00398 339 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 PIRO00625 290 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 TNFRSF13BO14836 293 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 GDF9O60383 454 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 FCMRO60667 390 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 ENTPD6O75354 484 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 HAND1O96004 215 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 SELPP16109 830 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 CD27P26842 260 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 GFRA1P56159 465 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 PLCXD2Q0VAA5 305 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OR2F1Q13607 317 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 FAM102AQ5T9C2 384 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 GDPGP1Q6ZNW5 385 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 DOLPP1Q86YN1 238 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 SIAH3Q8IW03 269 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 UEVLDQ8IX04 471 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 D2HGDHQ8N465 521 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OR2Y1Q8NGV0 311 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 Q8WTZ3 238 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 MOB3AQ96BX8 217 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 RNF183Q96D59 192 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 ZIC5Q96T25 663 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 FDXACB1Q9BRP7 624 aaPredicted RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
CDH1-205ENST00000562836 RBKSQ9H477 322 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 OXSMQ9NWU1 459 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 DCTN6O00399 190 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 BMP3P12645 472 aa8.41□□□□□ -1.06
CDH1-205ENST00000562836 CDKN2AP42771 156 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms