RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 GMNNO75496 209 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 GPANK1O95872 356 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 IGF2P01344 180 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 IGHV2-5P01817 119 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 IGHMP01871 453 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 H1F0P07305 194 aaKnown RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 CD14P08571 375 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 CTLA4P16410 223 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ZNF26P17031 533 aaPredicted RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 NAT1P18440 290 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 GNALP38405 381 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MDH1P40925 334 aaKnown RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 ERFP50548 548 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MMP15P51511 669 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ZNF133P52736 654 aaPredicted RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 PSME3P61289 254 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 SPIBQ01892 262 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 SCRN3Q0VDG4 424 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MEP1BQ16820 701 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MESTQ5EB52 335 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MTX3Q5HYI7 312 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ARL9Q6T311 187 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 MBOAT2Q6ZWT7 520 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 FAM86B1Q8N7N1 296 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ATG16L2Q8NAA4 619 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 FAM156AQ8NDB6 213 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 BHLHE23Q8NDY6 225 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 FNDC8Q8TC99 324 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ST7LQ8TDW4 575 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ZNF418Q8TF45 676 aaPredicted RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 RSRC1Q96IZ7 334 aaKnown RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 SLC6A7Q99884 636 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 EFCAB1Q9HAE3 211 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 NMNAT1Q9HAN9 279 aaPredicted RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 CYSLTR2Q9NS75 346 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 NKIRAS2Q9NYR9 191 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 PLEK2Q9NYT0 353 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 PTTG3PQ9NZH4 202 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 RPS6KA6Q9UK32 745 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 NDRG4Q9ULP0 352 aaKnown RBP6.19□□□□□ -1.42
SPG11-213ENST00000558988 TMEM5Q9Y2B1 443 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 AP3M1Q9Y2T2 418 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ENPP4Q9Y6X5 453 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 WNK2Q9Y3S1 2297 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 TRBV4-1A0A0J9YWV2 114 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 PRSS37A4D1T9 235 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 DNAJC9-AS1A6NH13 148 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 UNC119BA6NIH7 251 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 SLC22A2O15244 555 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 RER1O15258 196 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 KHDRBS3O75525 346 aaKnown RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 NDUFB2O95178 105 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 PPP1R3DO95685 299 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 TSPAN19P0C672 248 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 TNFSF4P23510 183 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 PSG7Q13046 419 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 AQP6Q13520 282 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 FHL1Q13642 323 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 HLXQ14774 488 aaPredicted RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 GLYATQ6IB77 296 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 CORO6Q6QEF8 472 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 LINC00346Q8IVM7 164 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 RNF113BQ8IZP6 322 aaKnown RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 BPIFB2Q8N4F0 458 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 OR10AD1Q8NGE0 317 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 SLC7A13Q8TCU3 470 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 ITLN1Q8WWA0 313 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 GCDHQ92947 438 aaPredicted RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 CMBLQ96DG6 245 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 TSSK2Q96PF2 358 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 ERMAPQ96PL5 475 aaPredicted RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 DUX5Q96PT3 197 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 HOPXQ9BPY8 73 aaPredicted RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 NSRP1Q9H0G5 558 aaKnown RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 FN3KQ9H479 309 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 WDR76Q9H967 626 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 PURGQ9UJV8 347 aaKnown RBP6.18□□□□□ -1.42
SPG11-213ENST00000558988 STARD10Q9Y365 291 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 DYSFO75923 2080 aa6.18□□□□□ -1.42
SPG11-213ENST00000558988 IGHV3OR16-10A0A075B7F0 116 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 HTR3EA5X5Y0 456 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 PRSS23O95084 383 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 HLA-DQA2P01906 255 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SDHAP31040 664 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 RPS6KA3P51812 740 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SEC61A1P61619 476 aaKnown RBP6.17□□□□□ -1.42
SPG11-213ENST00000558988 MXRA7P84157 204 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SLC3A1Q07837 685 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SCGB2A2Q13296 93 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SEC23BQ15437 767 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 ANKDD1AQ495B1 522 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 ARMCX4Q5H9R4 360 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 OR2T2Q6IF00 324 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 LEG1Q6P5S2 330 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 SMARCD3Q6STE5 483 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 Q6YL49 198 aa6.17□□□□□ -1.42
SPG11-213ENST00000558988 Q6ZR03 302 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms