RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NAA40Q86UY6 237 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 LRRC28Q86X40 367 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-210ENST00000558879 PROKR2Q8NFJ6 384 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 OR9Q1Q8NGQ5 310 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 OR13G1Q8NGZ3 307 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 ST7LQ8TDW4 575 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 ZNF582Q96NG8 517 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-210ENST00000558879 CDADC1Q9BWV3 514 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 TSSK6Q9BXA6 273 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 WDR76Q9H967 626 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 ARMC1Q9NVT9 282 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 SAMHD1Q9Y3Z3 626 aaKnown RBP14.31□□□□□ -0.12
LRRC28-210ENST00000558879 U3KQV3 271 aa14.31□□□□□ -0.12
LRRC28-210ENST00000558879 ARRDC5A6NEK1 342 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 TVP23AA6NH52 213 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 M0R135 149 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 FOXH1O75593 365 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 VENTXO95231 258 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 RAP2AP10114 183 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ZNF823P16415 610 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 SELEP16581 610 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 EPHA1P21709 976 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ZFP36P26651 326 aaKnown RBP14.3□□□□□ -0.12
LRRC28-210ENST00000558879 SLC25A1P53007 311 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 PRSS12P56730 875 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 SEC61A1P61619 476 aaKnown RBP14.3□□□□□ -0.12
LRRC28-210ENST00000558879 LCN2P80188 198 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 CD300LDQ6UXZ3 194 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ZNF771Q7L3S4 317 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ADGRG5Q8IZF4 528 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 BHLHE23Q8NDY6 225 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 OR2T33Q8NG76 320 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ZNF420Q8TAQ5 688 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-210ENST00000558879 CCDC124Q96CT7 223 aaKnown RBP14.3□□□□□ -0.12
LRRC28-210ENST00000558879 ZNF799Q96GE5 643 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 CLPTM1LQ96KA5 538 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 HCAR1Q9BXC0 346 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 OPN4Q9UHM6 478 aa14.3□□□□□ -0.12
LRRC28-210ENST00000558879 F5H5P2 479 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 DYNC1I1O14576 645 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 FSTL3O95633 263 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 SBK2P0C263 348 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 SPI1P17947 270 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 MDH2P40926 338 aaKnown RBP14.29□□□□□ -0.12
LRRC28-210ENST00000558879 GATA4P43694 442 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 SRP9P49458 86 aaKnown RBP14.29□□□□□ -0.12
LRRC28-210ENST00000558879 RAD23AP54725 363 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 TPTEP56180 551 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 SNAI3Q3KNW1 292 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 LINC01590Q5TEZ4 76 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 MUC20Q8N307 709 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-210ENST00000558879 KLHL36Q8N4N3 616 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 ATG16L2Q8NAA4 619 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 OR10G2Q8NGC3 310 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 OR51L1Q8NGJ5 315 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
LRRC28-210ENST00000558879 CEACAM18A8MTB9 384 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 LCATP04180 440 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 GYPBP06028 91 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 CLUP10909 449 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 CD200P41217 278 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 SLC6A9P48067 706 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 ENTPD1P49961 510 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 HILS1P60008 231 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 MAB21L1Q13394 359 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 TUSC1Q2TAM9 212 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 TEX30Q5JUR7 227 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 DRAM2Q6UX65 266 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 USP43Q70EL4 1123 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 DCXRQ7Z4W1 244 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 CELF2-AS1Q8N7Q2 184 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 DEFB108BQ8NET1 73 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 SPTSSAQ969W0 71 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 CMC2Q9NRP2 79 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 PCDHB10Q9UN67 800 aa14.28□□□□□ -0.12
LRRC28-210ENST00000558879 AQP12BA6NM10 295 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF878C9JN71 531 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 CST1P01037 141 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 HLA-DPB1P04440 258 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF12P17014 697 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 ADRA2CP18825 462 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 FMO3P31513 532 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 MALLQ13021 153 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 PGAP1Q75T13 922 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 MRPL21Q7Z2W9 205 aaKnown RBP14.27□□□□□ -0.13
LRRC28-210ENST00000558879 AQP12AQ8IXF9 295 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.27□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF511Q8NB15 262 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 NANPQ8TBE9 248 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 Q8TCH9 128 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 SLCO4A1Q96BD0 722 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 LRGUKQ96M69 825 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 C7orf69Q9H7B7 122 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 MMP26Q9NRE1 261 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 TMEM100Q9NV29 134 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.13
LRRC28-210ENST00000558879 C5orf63A6NC05 138 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms