RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RRNAD1Q96FB5 475 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 GAS2L1Q99501 681 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 NUDT16L1Q9BRJ7 211 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM231Q9H6L2 316 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 PCNX3Q9H6A9 2034 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 KIAA0100Q14667 2235 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 A6NIZ1 184 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 B4DGG1 531 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 ALG1L2C9J202 215 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 H0YIG0 161 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SOX1O00570 391 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 HEXAP06865 529 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 FAM157CP0CG43 387 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 ABOP16442 354 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 NR0B1P51843 470 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 RAP1BP61224 184 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 DCAF7P61962 342 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 RAP1AP62834 184 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SGCAQ16586 387 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 HLA-DQA1Q5Y7H0 255 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 OR10R2Q8NGX6 335 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 LILRB1Q8NHL6 650 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 TERB2Q8NHR7 220 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 IGFLR1Q9H665 355 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 CENPMQ9NSP4 180 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 LPAR3Q9UBY5 353 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 LOC101059948A0A1B0GTJ6 334 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 H0YIZ8 118 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 OR2T1O43869 369 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SSX5O60225 188 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 WISP1O95388 367 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 APOC1P02654 83 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC6A9P48067 706 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 MEOX2P50222 304 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 MMP16P51512 607 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF585AQ6P3V2 769 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SAT2Q96F10 170 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF285Q96NJ3 590 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC7A5P2Q9GIP4 190 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 RAB18Q9NP72 206 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 LANCL2Q9NS86 450 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC5A6Q9Y289 635 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 MMACHCQ9Y4U1 282 aa10.54□□□□□ -0.72
VIPAS39-211ENST00000557658 ATG2AQ2TAZ0 1938 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 CDC14CA4D256 554 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 IGKV3-11P04433 115 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 IFNA4P05014 189 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 CRYBA1P05813 215 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 SPP1P10451 314 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 PLCXD2Q0VAA5 305 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 PCK2Q16822 640 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 MST1LQ2TV78 715 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 TMPPEQ6ZT21 453 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 GRINAQ7Z429 371 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 SKA3Q8IX90 412 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 OR11A1Q9GZK7 315 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 FBLN5Q9UBX5 448 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 SYT7O43581 403 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 TSPAN2O60636 221 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 SFT2D2O95562 160 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 CA3P07451 260 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 CHRM2P08172 466 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 LYL1P12980 280 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 HLA-DOBP13765 273 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 EMP2P54851 167 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 FMODQ06828 376 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 KLHL24Q6TFL4 600 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 C5orf46Q6UWT4 87 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 DMBX1Q8NFW5 382 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 OR5D14Q8NGL3 314 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF721Q8TF20 911 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 TSLPQ969D9 159 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 RELTQ969Z4 430 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 NRIP2Q9BQI9 281 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 PTGES2Q9H7Z7 377 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 SOHLH2Q9NX45 425 aa10.53□□□□□ -0.72
VIPAS39-211ENST00000557658 CHD9Q3L8U1 2897 aa10.52□□□□□ -0.72
VIPAS39-211ENST00000557658 KNL1Q8NG31 2342 aa10.52□□□□□ -0.72
VIPAS39-211ENST00000557658 PRSS44E7EML9 344 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 NPIPA5E9PKD4 350 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 SEMA4FO95754 770 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 DDAH2O95865 285 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 GABRA4P48169 554 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 TDGQ13569 410 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 GFOD2Q3B7J2 385 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF101Q8IZC7 436 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 KDM8Q8N371 416 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 RXFP4Q8TDU9 374 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 RNF133Q8WVZ7 376 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 SCGB3A2Q96PL1 93 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms