RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TECTBQ96PL2 329 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 SYT4Q9H2B2 425 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 MRGBPQ9NV56 204 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 TMCC3Q9ULS5 477 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 NOP16Q9Y3C1 178 aaKnown RBP22.21■■□□□ 1.15
CHFR-218ENST00000540963 SNX13Q9Y5W8 968 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 A0A087WUU8 490 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 CDC42EP2O14613 210 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 NDUFA2O43678 99 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 FAM20BO75063 409 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 HLA-DPB1P04440 258 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 IER3P46695 156 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 KRR1Q13601 381 aaKnown RBP22.2■■□□□ 1.14
CHFR-218ENST00000540963 ZNF730Q6ZMV8 503 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 GDPGP1Q6ZNW5 385 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 ADCK1Q86TW2 530 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 SLC15A3Q8IY34 581 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 LRTOMTQ8WZ04 291 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 DPAGT1Q9H3H5 408 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 C16orf95Q9H693 158 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 POLR1DQ9Y2S0 133 aa22.2■■□□□ 1.14
CHFR-218ENST00000540963 IFNW1P05000 195 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 ZNF26P17031 533 aaPredicted RBP22.19■■□□□ 1.14
CHFR-218ENST00000540963 MAPRE2Q15555 327 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 C8orf82Q6P1X6 216 aaPredicted RBP22.19■■□□□ 1.14
CHFR-218ENST00000540963 PLPP7Q8NBV4 271 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 GPX7Q96SL4 187 aaPredicted RBP22.19■■□□□ 1.14
CHFR-218ENST00000540963 SLC22A4Q9H015 551 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 SIRPDQ9H106 197 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 NRIP3Q9NQ35 241 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 RNF7Q9UBF6 113 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 CTSZQ9UBR2 303 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 TMEM5Q9Y2B1 443 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 CAPN7Q9Y6W3 813 aa22.19■■□□□ 1.14
CHFR-218ENST00000540963 C5orf63A6NC05 138 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 FFAR1O14842 300 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 TSPAN15O95858 294 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 C2orf68Q2NKX9 166 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 KRTAP27-1Q3LI81 207 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 OR2T12Q8NG77 320 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 MMADHCQ9H3L0 296 aaPredicted RBP22.18■■□□□ 1.14
CHFR-218ENST00000540963 ANKRD19PQ9H560 264 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 RERGLQ9H628 205 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 FN3KRPQ9HA64 309 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 GID8Q9NWU2 228 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 RHCGQ9UBD6 479 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 LHFPL6Q9Y693 200 aa22.18■■□□□ 1.14
CHFR-218ENST00000540963 LGALS8O00214 317 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 NDUFB2O95178 105 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 PTBP3O95758 552 aaKnown RBP22.17■■□□□ 1.14
CHFR-218ENST00000540963 IGHV4-59P01825 116 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 GPR4P46093 362 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 COX10Q12887 443 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 GK2Q14410 553 aaPredicted RBP22.17■■□□□ 1.14
CHFR-218ENST00000540963 RRM2BQ7LG56 351 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 TSEN54Q7Z6J9 526 aaKnown RBP22.17■■□□□ 1.14
CHFR-218ENST00000540963 NUAK2Q9H093 628 aa22.17■■□□□ 1.14
CHFR-218ENST00000540963 ELOVL7A1L3X0 281 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 J3KTA2 159 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 SLC22A2O15244 555 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 ECDO95905 644 aaPredicted RBP22.16■■□□□ 1.14
CHFR-218ENST00000540963 CRABP1P29762 137 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 YAP1P46937 504 aaKnown RBP22.16■■□□□ 1.14
CHFR-218ENST00000540963 MALLQ13021 153 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 RSPO1Q2MKA7 263 aaPredicted RBP22.16■■□□□ 1.14
CHFR-218ENST00000540963 OTPQ5XKR4 325 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 DNM1P34Q6PK57 102 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 VTCN1Q7Z7D3 282 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 C1QL4Q86Z23 238 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 WDR76Q9H967 626 aa22.16■■□□□ 1.14
CHFR-218ENST00000540963 TRAV38-1A0A0B4J264 116 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 NME4O00746 187 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 PTP4A3O75365 173 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 COX4I1P13073 169 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 MDH1P40925 334 aaKnown RBP22.15■■□□□ 1.14
CHFR-218ENST00000540963 ECH1Q13011 328 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 MPPED2Q15777 294 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 Q6ZSV7 163 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 SCCPDHQ8NBX0 429 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 C19orf18Q8NEA5 215 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 RP9Q8TA86 221 aaKnown RBP22.15■■□□□ 1.14
CHFR-218ENST00000540963 LHX4Q969G2 390 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 UFSP2Q9NUQ7 469 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 SIGLEC7Q9Y286 467 aa22.15■■□□□ 1.14
CHFR-218ENST00000540963 A0A0U1RQK1 487 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 ADAM20O43506 726 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 TXNDC12O95881 172 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 ACSM4P0C7M7 580 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 LIPEQ05469 1076 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 PRAMEF6Q5VXH4 476 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 TBPL2Q6SJ96 375 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 DMRTB1Q96MA1 342 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 RPS6KA6Q9UK32 745 aa22.14■■□□□ 1.13
CHFR-218ENST00000540963 TET2Q6N021 2002 aaPredicted RBP22.13■■□□□ 1.13
CHFR-218ENST00000540963 GMDSO60547 372 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 TSPAN9O75954 239 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 OR8G1Q15617 311 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 PGAP1Q75T13 922 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 NPRL2Q8WTW4 380 aa22.13■■□□□ 1.13
CHFR-218ENST00000540963 SPRYD4Q8WW59 207 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms