RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SIRPDQ9H106 197 aa10.77□□□□□ -0.69
COPB1-209ENST00000533096 CNTD2Q9H8S5 307 aa10.77□□□□□ -0.69
COPB1-209ENST00000533096 FN3KRPQ9HA64 309 aa10.77□□□□□ -0.69
COPB1-209ENST00000533096 SMURF1Q9HCE7 757 aa10.77□□□□□ -0.69
COPB1-209ENST00000533096 SRA1Q9HD15 236 aaKnown RBP10.77□□□□□ -0.69
COPB1-209ENST00000533096 HTR3EA5X5Y0 456 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 LGALS8O00214 317 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 CDC42EP2O14613 210 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 DVL1O14640 695 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 PIN1P1O15428 100 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 FSTL3O95633 263 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 KDELR2P33947 212 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 COX10Q12887 443 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 MALLQ13021 153 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 GK2Q14410 553 aaPredicted RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 TRAM2Q15035 370 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 KCNJ8Q15842 424 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ZBED5Q49AG3 693 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 Q6ZPA2 131 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ZNF826PQ6ZT77 177 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 PGAP1Q75T13 922 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 PIP4P2Q8N4L2 257 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ST8SIA4Q92187 359 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ITPKCQ96DU7 683 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 PRRC1Q96M27 445 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ZNF583Q96ND8 569 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 PITX2Q99697 317 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 NSRP1Q9H0G5 558 aaKnown RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 PPA2Q9H2U2 334 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 NMNAT1Q9HAN9 279 aaPredicted RBP10.76□□□□□ -0.69
COPB1-209ENST00000533096 C1orf123Q9NWV4 160 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 ONECUT1Q9UBC0 465 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 RAB21Q9UL25 225 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 IER3IP1Q9Y5U9 82 aa10.76□□□□□ -0.69
COPB1-209ENST00000533096 A0A087WUU8 490 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 TRAV38-1A0A0B4J264 116 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 hCG_1807616A0A1W2PRN6 198 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 C5orf63A6NC05 138 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 AHCYL1O43865 530 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 GATA4P43694 442 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 DLX1P56177 255 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 SELENOWP63302 87 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 KRR1Q13601 381 aaKnown RBP10.75□□□□□ -0.69
COPB1-209ENST00000533096 ANKDD1AQ495B1 522 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 Q6ZTK2 550 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 CALHM3Q86XJ0 350 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 LINC00346Q8IVM7 164 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 FGFRL1Q8N441 504 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 LNX2Q8N448 690 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 Q8TCH9 128 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
COPB1-209ENST00000533096 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 GGT3PA6NGU5 568 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 A6NLC8 198 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 J3QW42 95 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 IFNW1P05000 195 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 GGT2P36268 569 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 TGFBR2P37173 567 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 CD200P41217 278 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 CDKN2AP42771 156 aaKnown RBP10.74□□□□□ -0.69
COPB1-209ENST00000533096 ELF3P78545 371 aaPredicted RBP10.74□□□□□ -0.69
COPB1-209ENST00000533096 SF3A3Q12874 501 aaKnown RBP eCLIP10.74□□□□□ -0.69
COPB1-209ENST00000533096 ERICH5Q6P6B1 374 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 MBOAT2Q6ZWT7 520 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 MRPL21Q7Z2W9 205 aaKnown RBP10.74□□□□□ -0.69
COPB1-209ENST00000533096 VTCN1Q7Z7D3 282 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 RNF113BQ8IZP6 322 aaKnown RBP10.74□□□□□ -0.69
COPB1-209ENST00000533096 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 PNKDQ8N490 385 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 CELF2-AS1Q8N7Q2 184 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 OR2AJ1Q8NGZ0 328 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 LRTOMTQ8WZ04 291 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 SGCDQ92629 289 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 COQ7Q99807 217 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 FOXJ3Q9UPW0 622 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 CAB39Q9Y376 341 aaPredicted RBP10.74□□□□□ -0.69
COPB1-209ENST00000533096 LHFPL6Q9Y693 200 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 NOTCH1P46531 2555 aa10.74□□□□□ -0.69
COPB1-209ENST00000533096 A0A0G2JND7 137 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 LOC100653049A0A140TA62 436 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 CD300LBA8K4G0 201 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 FFAR1O14842 300 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 NDUFA2O43678 99 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 PTP4A3O75365 173 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 TSPAN9O75954 239 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 KRT34O76011 436 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 NDUFB2O95178 105 aa10.73□□□□□ -0.69
COPB1-209ENST00000533096 ZNF682O95780 498 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms