RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 OPRD1P41143 372 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 OR8G1Q15617 311 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 EXT1Q16394 746 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 COL24A1Q17RW2 1714 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 ERASQ7Z444 233 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 MYPOPQ86VE0 399 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-229ENST00000531014 ANGPTL5Q86XS5 388 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 KLHDC8AQ8IYD2 350 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 ARL6IP6Q8N6S5 226 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 DEFB124Q8NES8 71 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 OR5D18Q8NGL1 313 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 LILRB1Q8NHL6 650 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-229ENST00000531014 H1FXQ92522 213 aaKnown RBP6.62□□□□□ -1.35
CTNND1-229ENST00000531014 SLC25A33Q9BSK2 321 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 GORASP2Q9H8Y8 452 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 Q9N2K0 584 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 NDUFB11Q9NX14 153 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 KCND3Q9UK17 655 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 WSB1Q9Y6I7 421 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 TRAV27A0A087WT01 109 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 TRDV1A0A1B0GX56 115 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 OPN1MWP04001 364 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 OPN1MW2P0DN77 364 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 OPN1MW3P0DN78 364 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 GZMKP49863 264 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 TRIP6Q15654 476 aaKnown RBP6.62□□□□□ -1.35
CTNND1-229ENST00000531014 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 SCCPDHQ8NBX0 429 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 PEX11GQ96HA9 241 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 CSNK1G1Q9HCP0 422 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 RARRES3Q9UL19 164 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF443Q9Y2A4 671 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-229ENST00000531014 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CTNND1-229ENST00000531014 RNASET2O00584 256 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF749O43361 778 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 VAMP5O95183 116 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 POU3F2P20265 443 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 AOAHP28039 575 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 CD38P28907 300 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ACVRL1P37023 503 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LIPAP38571 399 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LIPNQ5VXI9 398 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GDPD3Q7L5L3 318 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DOK4Q8TEW6 326 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 C2orf50Q96LR7 162 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 COMMD5Q9GZQ3 224 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DMRT3Q9NQL9 472 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 VDAC3Q9Y277 283 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DNAJC15Q9Y5T4 150 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 MYH2Q9UKX2 1941 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 SNRPGP15A8MWD9 76 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF593O00488 134 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LINC01565O15544 149 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 EFSO43281 561 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 BCL3P20749 454 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 METAP1P53582 386 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 TMPRSS3P57727 454 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF816Q0VGE8 651 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF77Q15935 545 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 RTL8BQ17RB0 113 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 SOWAHCQ53LP3 525 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 WBP2NLQ6ICG8 309 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 RANBP10Q6VN20 620 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 COMMD6Q7Z4G1 85 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 VASH2Q86V25 355 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 MFSD4AQ8N468 514 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 CYB5D2Q8WUJ1 264 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ST6GALNAC4Q9H4F1 302 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 MMP26Q9NRE1 261 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 DDX60LQ5H9U9 1706 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 MKRN2OSH3BPM6 223 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 NRASP01111 189 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 HRASP01112 189 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 KRASP01116 189 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GABRB1P18505 474 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 BTF3P20290 206 aaKnown RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 IVDP26440 423 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 SLC6A1P30531 599 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 BMI1P35226 326 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ERVFRD-1P60508 538 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 LSM11P83369 360 aaKnown RBP eCLIP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 POU3F1Q03052 451 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 TSPAN31Q12999 210 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 COL9A3Q14050 684 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-229ENST00000531014 OR8B8Q15620 311 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 CD226Q15762 336 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 TFAP2EQ6VUC0 442 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 C12orf54Q6X4T0 127 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 GALNT16Q8N428 558 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 ZFP30Q9Y2G7 519 aa6.61□□□□□ -1.35
CTNND1-229ENST00000531014 NID2Q14112 1375 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms