RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 GPR34Q9UPC5 381 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF253O75346 499 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 SP9P0CG40 484 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 SLC35E2BP0CK96 405 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OPRD1P41143 372 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OR8G1Q15617 311 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 EXT1Q16394 746 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 COL24A1Q17RW2 1714 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ERASQ7Z444 233 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 MYPOPQ86VE0 399 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ANGPTL5Q86XS5 388 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 KLHDC8AQ8IYD2 350 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ARL6IP6Q8N6S5 226 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 DEFB124Q8NES8 71 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OR5D18Q8NGL1 313 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 LILRB1Q8NHL6 650 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 H1FXQ92522 213 aaKnown RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 SLC25A33Q9BSK2 321 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 GORASP2Q9H8Y8 452 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 Q9N2K0 584 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 NDUFB11Q9NX14 153 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 KCND3Q9UK17 655 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 WSB1Q9Y6I7 421 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 TRAV27A0A087WT01 109 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 TRDV1A0A1B0GX56 115 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OPN1MWP04001 364 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OPN1MW2P0DN77 364 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OPN1MW3P0DN78 364 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 GZMKP49863 264 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 TRIP6Q15654 476 aaKnown RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 SCCPDHQ8NBX0 429 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PEX11GQ96HA9 241 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 CSNK1G1Q9HCP0 422 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 RARRES3Q9UL19 164 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF443Q9Y2A4 671 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 RNASET2O00584 256 aaKnown RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF749O43361 778 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 VAMP5O95183 116 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 POU3F2P20265 443 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 AOAHP28039 575 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 CD38P28907 300 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ACVRL1P37023 503 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 LIPAP38571 399 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 LIPNQ5VXI9 398 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 GDPD3Q7L5L3 318 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 DOK4Q8TEW6 326 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 C2orf50Q96LR7 162 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 COMMD5Q9GZQ3 224 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 HSD3B7Q9H2F3 369 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 DMRT3Q9NQL9 472 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 VDAC3Q9Y277 283 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 DNAJC15Q9Y5T4 150 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 MYH2Q9UKX2 1941 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 SNRPGP15A8MWD9 76 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF593O00488 134 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 LINC01565O15544 149 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 EFSO43281 561 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 BCL3P20749 454 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 METAP1P53582 386 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 TMPRSS3P57727 454 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF816Q0VGE8 651 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF77Q15935 545 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 RTL8BQ17RB0 113 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 SOWAHCQ53LP3 525 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 WBP2NLQ6ICG8 309 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 RANBP10Q6VN20 620 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 COMMD6Q7Z4G1 85 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 VASH2Q86V25 355 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 MFSD4AQ8N468 514 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 CYB5D2Q8WUJ1 264 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ST6GALNAC4Q9H4F1 302 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 MMP26Q9NRE1 261 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 DDX60LQ5H9U9 1706 aaKnown RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 MKRN2OSH3BPM6 223 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 NRASP01111 189 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 HRASP01112 189 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 KRASP01116 189 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 GABRB1P18505 474 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 BTF3P20290 206 aaKnown RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 IVDP26440 423 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 SLC6A1P30531 599 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 BMI1P35226 326 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 ERVFRD-1P60508 538 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 LSM11P83369 360 aaKnown RBP eCLIP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 POU3F1Q03052 451 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 TSPAN31Q12999 210 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 COL9A3Q14050 684 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-216ENST00000527467 OR8B8Q15620 311 aa6.61□□□□□ -1.35
CTNND1-216ENST00000527467 CD226Q15762 336 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 344.3 ms