RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 OR10AD1Q8NGE0 317 aa15.08■□□□□ 0
TPM3-220ENST00000509601 OR9Q1Q8NGQ5 310 aa15.08■□□□□ 0
TPM3-220ENST00000509601 ZNF420Q8TAQ5 688 aaPredicted RBP15.08■□□□□ 0
TPM3-220ENST00000509601 SLCO4A1Q96BD0 722 aa15.08■□□□□ 0
TPM3-220ENST00000509601 ASB9Q96DX5 294 aa15.08■□□□□ 0
TPM3-220ENST00000509601 CHID1Q9BWS9 393 aa15.08■□□□□ 0
TPM3-220ENST00000509601 REEP1Q9H902 201 aa15.08■□□□□ 0
TPM3-220ENST00000509601 TMEM165Q9HC07 324 aa15.08■□□□□ 0
TPM3-220ENST00000509601 MMP26Q9NRE1 261 aa15.08■□□□□ 0
TPM3-220ENST00000509601 TMEM100Q9NV29 134 aa15.08■□□□□ 0
TPM3-220ENST00000509601 FAM53CQ9NYF3 392 aa15.08■□□□□ 0
TPM3-220ENST00000509601 POLR3KQ9Y2Y1 108 aaPredicted RBP15.08■□□□□ 0
TPM3-220ENST00000509601 PPIAL4EA0A075B759 164 aa15.07■□□□□ 0
TPM3-220ENST00000509601 PPIAL4CA0A0B4J2A2 164 aa15.07■□□□□ 0
TPM3-220ENST00000509601 C5orf63A6NC05 138 aa15.07■□□□□ 0
TPM3-220ENST00000509601 PPIAL4DF5H284 164 aa15.07■□□□□ 0
TPM3-220ENST00000509601 F5H5P2 479 aa15.07■□□□□ 0
TPM3-220ENST00000509601 TRAPPC2LH3BP13 241 aa15.07■□□□□ 0
TPM3-220ENST00000509601 HLA-DPB1P04440 258 aa15.07■□□□□ 0
TPM3-220ENST00000509601 PPIAL4FP0DN26 164 aa15.07■□□□□ 0
TPM3-220ENST00000509601 RAP2AP10114 183 aa15.07■□□□□ 0
TPM3-220ENST00000509601 ADRA2CP18825 462 aa15.07■□□□□ 0
TPM3-220ENST00000509601 OTX1P32242 354 aaPredicted RBP15.07■□□□□ 0
TPM3-220ENST00000509601 SLC25A1P53007 311 aa15.07■□□□□ 0
TPM3-220ENST00000509601 SEC61A1P61619 476 aaKnown RBP15.07■□□□□ 0
TPM3-220ENST00000509601 SHQ1Q6PI26 577 aaKnown RBP15.07■□□□□ 0
TPM3-220ENST00000509601 C1QL2Q7Z5L3 287 aa15.07■□□□□ 0
TPM3-220ENST00000509601 ADGRG5Q8IZF4 528 aa15.07■□□□□ 0
TPM3-220ENST00000509601 SPICQ8N5J4 248 aa15.07■□□□□ 0
TPM3-220ENST00000509601 BHLHE23Q8NDY6 225 aa15.07■□□□□ 0
TPM3-220ENST00000509601 ST7LQ8TDW4 575 aa15.07■□□□□ 0
TPM3-220ENST00000509601 POP5Q969H6 163 aaKnown RBP15.07■□□□□ 0
TPM3-220ENST00000509601 NIPSNAP1Q9BPW8 284 aa15.07■□□□□ 0
TPM3-220ENST00000509601 HCAR1Q9BXC0 346 aa15.07■□□□□ 0
TPM3-220ENST00000509601 C7orf69Q9H7B7 122 aa15.07■□□□□ 0
TPM3-220ENST00000509601 DDX28Q9NUL7 540 aaKnown RBP15.07■□□□□ 0
TPM3-220ENST00000509601 TBC1D23Q9NUY8 699 aa15.07■□□□□ 0
TPM3-220ENST00000509601 ARMC1Q9NVT9 282 aa15.07■□□□□ 0
TPM3-220ENST00000509601 BAIAP2Q9UQB8 552 aa15.07■□□□□ 0
TPM3-220ENST00000509601 A0A0A6YYJ9 748 aa15.06■□□□□ 0
TPM3-220ENST00000509601 IGHV3-64DA0A0J9YX35 117 aa15.06■□□□□ 0
TPM3-220ENST00000509601 F5H0A9 414 aaPredicted RBP15.06■□□□□ 0
TPM3-220ENST00000509601 M0R135 149 aa15.06■□□□□ 0
TPM3-220ENST00000509601 DYNC1I1O14576 645 aa15.06■□□□□ 0
TPM3-220ENST00000509601 FOXH1O75593 365 aa15.06■□□□□ 0
TPM3-220ENST00000509601 SOX14O95416 240 aa15.06■□□□□ 0
TPM3-220ENST00000509601 GYPBP06028 91 aa15.06■□□□□ 0
TPM3-220ENST00000509601 WNT2P09544 360 aa15.06■□□□□ 0
TPM3-220ENST00000509601 CLUP10909 449 aa15.06■□□□□ 0
TPM3-220ENST00000509601 SELEP16581 610 aa15.06■□□□□ 0
TPM3-220ENST00000509601 SPI1P17947 270 aa15.06■□□□□ 0
TPM3-220ENST00000509601 GATA3P23771 443 aa15.06■□□□□ 0
TPM3-220ENST00000509601 SRP9P49458 86 aaKnown RBP15.06■□□□□ 0
TPM3-220ENST00000509601 MAB21L1Q13394 359 aa15.06■□□□□ 0
TPM3-220ENST00000509601 TEX30Q5JUR7 227 aa15.06■□□□□ 0
TPM3-220ENST00000509601 LINC01590Q5TEZ4 76 aa15.06■□□□□ 0
TPM3-220ENST00000509601 DCXRQ7Z4W1 244 aa15.06■□□□□ 0
TPM3-220ENST00000509601 TMEM179BQ7Z7N9 219 aa15.06■□□□□ 0
TPM3-220ENST00000509601 KLHL36Q8N4N3 616 aa15.06■□□□□ 0
TPM3-220ENST00000509601 SEMA6DQ8NFY4 1073 aa15.06■□□□□ 0
TPM3-220ENST00000509601 OR2T33Q8NG76 320 aa15.06■□□□□ 0
TPM3-220ENST00000509601 OR10G2Q8NGC3 310 aa15.06■□□□□ 0
TPM3-220ENST00000509601 ZNF799Q96GE5 643 aa15.06■□□□□ 0
TPM3-220ENST00000509601 THTPAQ9BU02 230 aa15.06■□□□□ 0
TPM3-220ENST00000509601 PCDHB10Q9UN67 800 aa15.06■□□□□ 0
TPM3-220ENST00000509601 COMMD3-BMI1R4GMX3 469 aa15.06■□□□□ 0
TPM3-220ENST00000509601 IFNL4K9M1U5 179 aa15.05■□□□□ -0
TPM3-220ENST00000509601 ZNF593O00488 134 aaPredicted RBP15.05■□□□□ -0
TPM3-220ENST00000509601 ZNF205O95201 554 aa15.05■□□□□ -0
TPM3-220ENST00000509601 CYB5R3P00387 301 aaPredicted RBP15.05■□□□□ -0
TPM3-220ENST00000509601 FSHBP01225 129 aa15.05■□□□□ -0
TPM3-220ENST00000509601 EPHA1P21709 976 aa15.05■□□□□ -0
TPM3-220ENST00000509601 FMO3P31513 532 aa15.05■□□□□ -0
TPM3-220ENST00000509601 MDH2P40926 338 aaKnown RBP15.05■□□□□ -0
TPM3-220ENST00000509601 MALLQ13021 153 aa15.05■□□□□ -0
TPM3-220ENST00000509601 SNAI3Q3KNW1 292 aa15.05■□□□□ -0
TPM3-220ENST00000509601 PGAP1Q75T13 922 aa15.05■□□□□ -0
TPM3-220ENST00000509601 MOGAT3Q86VF5 341 aa15.05■□□□□ -0
TPM3-220ENST00000509601 TEX29Q8N6K0 151 aa15.05■□□□□ -0
TPM3-220ENST00000509601 DEFB108BQ8NET1 73 aa15.05■□□□□ -0
TPM3-220ENST00000509601 GIPC3Q8TF64 312 aa15.05■□□□□ -0
TPM3-220ENST00000509601 CANT1Q8WVQ1 401 aa15.05■□□□□ -0
TPM3-220ENST00000509601 SPTSSAQ969W0 71 aa15.05■□□□□ -0
TPM3-220ENST00000509601 CCDC124Q96CT7 223 aaKnown RBP15.05■□□□□ -0
TPM3-220ENST00000509601 LRGUKQ96M69 825 aa15.05■□□□□ -0
TPM3-220ENST00000509601 FEVQ99581 238 aa15.05■□□□□ -0
TPM3-220ENST00000509601 AQP12BA6NM10 295 aa15.04■□□□□ -0
TPM3-220ENST00000509601 CEACAM18A8MTB9 384 aa15.04■□□□□ -0
TPM3-220ENST00000509601 CST1P01037 141 aa15.04■□□□□ -0
TPM3-220ENST00000509601 GATA4P43694 442 aa15.04■□□□□ -0
TPM3-220ENST00000509601 ENTPD1P49961 510 aa15.04■□□□□ -0
TPM3-220ENST00000509601 ZNF92Q03936 586 aa15.04■□□□□ -0
TPM3-220ENST00000509601 GK3PQ14409 553 aa15.04■□□□□ -0
TPM3-220ENST00000509601 ZNF181Q2M3W8 571 aa15.04■□□□□ -0
TPM3-220ENST00000509601 FAM201AQ5SY85 155 aa15.04■□□□□ -0
TPM3-220ENST00000509601 USP43Q70EL4 1123 aa15.04■□□□□ -0
TPM3-220ENST00000509601 AQP12AQ8IXF9 295 aa15.04■□□□□ -0
TPM3-220ENST00000509601 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.04■□□□□ -0
TPM3-220ENST00000509601 NANPQ8TBE9 248 aa15.04■□□□□ -0
TPM3-220ENST00000509601 CMC2Q9NRP2 79 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms