RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PIPP12273 146 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CA5AP35218 305 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 GPR4P46093 362 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 OR1E2P47887 323 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 DSCR9P59020 149 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ZFP36L1Q07352 338 aaKnown RBP2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CRMP1Q14194 572 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 MEDAGQ5VYS4 303 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 LCN10Q6JVE6 187 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ESPNLQ6ZVH7 1005 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SGPP2Q8IWX5 399 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF781Q8N8C0 355 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 OR5J2Q8NH18 312 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CCL17Q92583 94 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 TMIGD2Q96BF3 282 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 MS4A6EQ96DS6 147 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 PYURFQ96I23 114 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 GHITMQ9H3K2 345 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 NIPAL2Q9H841 368 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 TUBA4BQ9H853 241 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 NT5DC2Q9H857 520 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ZFP64Q9NPA5 681 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SLCO1C1Q9NYB5 712 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 RHCGQ9UBD6 479 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 METRNQ9UJH8 293 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 RASD1Q9Y272 281 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 DTX4Q9Y2E6 619 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 GPR52Q9Y2T5 361 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 C5orf49A4QMS7 147 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 A8MT66 165 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CDRT15L2A8MXV6 281 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SHISA8B8ZZ34 492 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SYT5O00445 386 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 TDGF1P13385 188 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CEACAM3P40198 252 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 CAV2P51636 162 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 AKR1D1P51857 326 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SRSF2Q01130 221 aaKnown RBP2.66□□□□□ -1.98
NEDD4-208ENST00000508342 AKR1C1Q04828 323 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ODF1Q14990 250 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 Q5PR19 223 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 WDR73Q6P4I2 378 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 TRMT10BQ6PF06 316 aaKnown RBP2.66□□□□□ -1.98
NEDD4-208ENST00000508342 IDO2Q6ZQW0 420 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 USP43Q70EL4 1123 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF683Q8IZ20 524 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 SIMC1Q8NDZ2 872 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 OR5W2Q8NH69 310 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 TSSK2Q96PF2 358 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ST6GALNAC5Q9BVH7 336 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 ADAM29Q9UKF5 820 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 RAB26Q9ULW5 256 aa2.66□□□□□ -1.98
NEDD4-208ENST00000508342 NUP210LQ5VU65 1888 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 PRKNO60260 465 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 VAMP5O95183 116 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 MAS1P04201 325 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CBR1P16152 277 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 S100A4P26447 101 aaKnown RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CDKN1BP46527 198 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 PCOLCEQ15113 449 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RHEBQ15382 184 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 PSG3Q16557 428 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RTL8BQ17RB0 113 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 FAM111BQ6SJ93 734 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 BHLHA9Q7RTU4 235 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 P2RY8Q86VZ1 359 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CLRN3Q8NCR9 226 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 OR7G3Q8NG95 312 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 OR2Z1Q8NG97 314 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 HAVCR2Q8TDQ0 301 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF418Q8TF45 676 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 DGCR14Q96DF8 476 aaKnown RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 GMPPAQ96IJ6 420 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RNF170Q96K19 258 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 INTS14Q96SY0 518 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CCDC32Q9BV29 185 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 NOX3Q9HBY0 568 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 GPATCH2Q9NW75 528 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CISD1Q9NZ45 108 aaKnown RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RNF115Q9Y4L5 304 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 TRAV6A0A075B6T7 132 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 A0A1W2PPK0 400 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM213A2RRL7 107 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CXCL13O43927 109 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CTAG2O75638 210 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 KNG1P01042 644 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 CRYGCP07315 174 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RPS20P60866 119 aaKnown RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 NAAAQ02083 359 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 ADIPOQQ15848 244 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 MPEG1Q2M385 716 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 VMACQ2NL98 169 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 AKR1C8PQ5T2L2 129 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RTL6Q6ICC9 239 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 MFSD12Q6NUT3 480 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 SFXN4Q6P4A7 337 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 FBXW12Q6X9E4 464 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 FAM57BQ71RH2 274 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms