RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 P2RX1P51575 399 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ZNF117Q03924 483 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SPOCK1Q08629 439 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 RASGEF1BQ0VAM2 473 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SKP2Q13309 424 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 OR1Q1Q15612 314 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 NPTX1Q15818 432 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 CTF1Q16619 201 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 TIMM23BQ5SRD1 257 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ZFP1Q6P2D0 407 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 B3GLCTQ6Y288 498 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 IL17RELQ6ZVW7 336 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 CYP4Z1Q86W10 505 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 MISPQ8IVT2 679 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ZNF440Q8IYI8 595 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SLC43A2Q8N370 569 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 PAPD5Q8NDF8 572 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 OR52J3Q8NH60 311 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ZNF563Q8TA94 476 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 GPR119Q8TDV5 335 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 C10orf105Q8TEF2 133 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 GEMIN6Q8WXD5 167 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 POP5Q969H6 163 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 MUCL1Q96DR8 90 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 DUS3LQ96G46 650 aaKnown RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 TMEM68Q96MH6 324 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ZNF300Q96RE9 604 aaPredicted RBP5.52□□□□□ -1.53
VIM-207ENST00000495528 PKP2Q99959 881 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 DHRS9Q9BPW9 319 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 FNDC11Q9BVV2 318 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SEMA6AQ9H2E6 1030 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 MAGIXQ9H6Y5 334 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 TMEM27Q9HBJ8 222 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 HHATLQ9HCP6 504 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ARMC1Q9NVT9 282 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 SELENONQ9NZV5 590 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 RPS6KB2Q9UBS0 482 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 RIMS3Q9UJD0 308 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 KCNS2Q9ULS6 477 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ICAM5Q9UMF0 924 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 ADAM18Q9Y3Q7 739 aa5.52□□□□□ -1.53
VIM-207ENST00000495528 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.52□□□□□ -1.533e-7■■■■□ 24.5
VIM-207ENST00000495528 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 A0A087X0M5 115 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 A0A1B0GX30 115 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 A0A1W2PR80 420 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 OR5H1A6NKK0 313 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 GJE1A6NN92 205 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 FFAR1O14842 300 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 SMAD9O15198 467 aaKnown RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 MGRN1O60291 552 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 CYTIPO60759 359 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 RAD51DO75771 328 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 LY6HO94772 140 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 PPP1R3DO95685 299 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 IGHV3-9P01782 118 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 SEMG1P04279 462 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 ANPEPP15144 967 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 PGCP20142 388 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 COX5AP20674 150 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 USF1P22415 310 aaPredicted RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 IGFBP5P24593 272 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 FASP25445 335 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 HTR2AP28223 471 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 ELK4P28324 431 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 IFNA8P32881 189 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 FABP6P51161 128 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 ZNF83P51522 516 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 TAS2R41P59536 307 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 COPZ1P61923 177 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 EPS8Q12929 822 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 RCN1Q15293 331 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 IQCCQ4KMZ1 466 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 FAM120AOSQ5T036 256 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 SIGIRRQ6IA17 410 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 OR2T5Q6IEZ7 315 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 C16orf82Q7Z2V1 217 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 PIWIL3Q7Z3Z3 882 aaKnown RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 RANBP3LQ86VV4 465 aaPredicted RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 P2RY8Q86VZ1 359 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 MUC15Q8N387 334 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 ZNF433Q8N7K0 673 aaPredicted RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 OR2T29Q8NH02 315 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 OR52N5Q8NH56 324 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 OR5W2Q8NH69 310 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 RADILQ96JH8 1075 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 PCGF1Q9BSM1 259 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 C1QTNF6Q9BXI9 259 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 DCLRE1BQ9H816 532 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 NMNAT1Q9HAN9 279 aaPredicted RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 RANGRFQ9HD47 186 aaPredicted RBP5.51□□□□□ -1.53
VIM-207ENST00000495528 ACER3Q9NUN7 267 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 KLHL9Q9P2J3 617 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 DNAJB9Q9UBS3 223 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 POU2F3Q9UKI9 436 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 SLC25A15Q9Y619 301 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 U3KQV3 271 aa5.51□□□□□ -1.53
VIM-207ENST00000495528 A0A1B0GWA3 101 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms