RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CSNK2BP67870 215 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 SWI5Q1ZZU3 235 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 ZNF829Q3KNS6 432 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-235ENST00000495515 PLEKHG7Q6ZR37 379 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 TRMT61AQ96FX7 289 aaKnown RBP14.69□□□□□ -0.06
HDAC6-235ENST00000495515 SYT3Q9BQG1 590 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 ANKRD60Q9BZ19 345 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 Q9H521 79 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 DYNLRB1Q9NP97 96 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 INPP5EQ9NRR6 644 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 FZR1Q9UM11 496 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 LRP12Q9Y561 859 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 SPG11Q96JI7 2443 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 MYO9AB2RTY4 2548 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 PLCE1Q9P212 2302 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 IGLV3-9A0A075B6K5 115 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 ACOD1A6NK06 481 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 M0R233 179 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 XRCC2O43543 280 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 SULT1C4O75897 302 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 IGHV3-13P01766 116 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 ERCC1P07992 297 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 RAC2P15153 192 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 ZNF121P58317 390 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 PSMA6P60900 246 aaKnown RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 SMN1Q16637 294 aaKnown RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 NKPD1Q17RQ9 610 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 DEFB113Q30KQ7 82 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 C11orf71Q6IPW1 123 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 FAM220AQ7Z4H9 259 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 NAA40Q86UY6 237 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 FBLIM1Q8WUP2 373 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 IGFBPL1Q8WX77 278 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 PGAM5Q96HS1 289 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 ZNF184Q99676 751 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 CACNG6Q9BXT2 260 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 TTTY10Q9BZA0 68 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 OR10A2Q9H208 303 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 MS4A5Q9H3V2 200 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 OPA3Q9H6K4 179 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 PTTG3PQ9NZH4 202 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 CGGBP1Q9UFW8 167 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-235ENST00000495515 N6AMT1Q9Y5N5 214 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 DCHS2Q6V1P9 2916 aa14.68□□□□□ -0.06
HDAC6-235ENST00000495515 TMEM269A0A1B0GVZ9 245 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 TMEM129A0AVI4 362 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 METTL15A6NJ78 407 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 J3QRE1 110 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 OVOL3O00110 214 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 PSMD9O00233 223 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 TBX1O43435 398 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 TACSTD2P09758 323 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 SLC2A1P11166 492 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 SELEP16581 610 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 MYF6P23409 242 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 CFL1P23528 166 aaKnown RBP14.67□□□□□ -0.06
HDAC6-235ENST00000495515 DCKP27707 260 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 LIPAP38571 399 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 PPOXP50336 477 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 ACTA2P62736 377 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 ACTG2P63267 376 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 MED21Q13503 144 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 MSMPQ1L6U9 139 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 FBXW12Q6X9E4 464 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 FAM57BQ71RH2 274 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 MRPL21Q7Z2W9 205 aaKnown RBP14.67□□□□□ -0.06
HDAC6-235ENST00000495515 KCTD20Q7Z5Y7 419 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 EGFL6Q8IUX8 553 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 RFLNBQ8N5W9 214 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 YIPF7Q8N8F6 280 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 HAVCR1Q96D42 359 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 CMBLQ96DG6 245 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 RGCCQ9H4X1 137 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 BRD7Q9NPI1 651 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 CYSLTR2Q9NS75 346 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 TAAR3PQ9P1P4 343 aa14.67□□□□□ -0.06
HDAC6-235ENST00000495515 APCP25054 2843 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 FBN2P35556 2912 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 PLSCR5A0PG75 271 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 EFCAB10A6NFE3 127 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 H7C417 338 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 TIMM8AO60220 97 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-235ENST00000495515 FAM20BO75063 409 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 CLPTM1O96005 669 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 IGHA1P01876 353 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 PAX1P15863 534 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 MPV17P39210 176 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 MMP16P51512 607 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 ZNF85Q03923 595 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 TIGD6Q17RP2 521 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 ZMAT1Q5H9K5 638 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 PGAP1Q75T13 922 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 LRP11Q86VZ4 500 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 OR52I1Q8NGK6 324 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 GSX2Q9BZM3 304 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 RAB1BQ9H0U4 201 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 MOB1AQ9H8S9 216 aa14.66□□□□□ -0.06
HDAC6-235ENST00000495515 FGF20Q9NP95 211 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-235ENST00000495515 PLCXD1Q9NUJ7 323 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms