RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 UTS2O95399 124 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 IL33O95760 270 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 CD1CP29017 333 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 ZNF117Q03924 483 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 OR51F2Q8NH61 342 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 MICU1Q9BPX6 476 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 ZNF251Q9BRH9 671 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 NAA11Q9BSU3 229 aaPredicted RBP13.69□□□□□ -0.22
SDF4-207ENST00000494748 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 PTAFRP25105 342 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 SEC13P55735 322 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 NKAIN3Q8N8D7 197 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 OR52N4Q8NGI2 321 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 ST7LQ8TDW4 575 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 EIF1BO60739 113 aaKnown RBP13.69□□□□□ -0.22
SDF4-207ENST00000494748 AGAP20933 346 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 EIF1P41567 113 aaKnown RBP13.69□□□□□ -0.22
SDF4-207ENST00000494748 DNASE1L1P49184 302 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 HTRA3P83110 453 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 ZNF585AQ6P3V2 769 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 KCTD18Q6PI47 426 aaPredicted RBP13.69□□□□□ -0.22
SDF4-207ENST00000494748 OR10C1Q96KK4 312 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 PRTFDC1Q9NRG1 225 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 GPR132Q9UNW8 380 aa13.69□□□□□ -0.22
SDF4-207ENST00000494748 SGCEO43556 437 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 RNH1P13489 461 aaKnown RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 RCC1P18754 421 aaPredicted RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 CENPAP49450 140 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 ZP2Q05996 745 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 ANKRD55Q3KP44 614 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 C15orf54Q8N8G6 183 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 DTWD2Q8NBA8 298 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 EDARADDQ8WWZ3 215 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 FAM46BQ96A09 425 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 CDC6Q99741 560 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 PTGES2Q9H7Z7 377 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 ASH2LQ9UBL3 628 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 OR52A1Q9UKL2 312 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 TMEM184BQ9Y519 407 aaPredicted RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 TIMM10BQ9Y5J6 103 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 XKRYO14609 159 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 IGHMP01871 453 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 CSTBP04080 98 aaKnown RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 CBR1P16152 277 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 ID4P47928 161 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 SGCBQ16585 318 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 NICN1Q9BSH3 213 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 PMS2P1A4D2B8 440 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 GMFGO60234 142 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 LRP3O75074 770 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 TBPP20226 339 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 COL9A1P20849 921 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 ZNF296Q8WUU4 475 aaPredicted RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
SDF4-207ENST00000494748 TXNIPQ9H3M7 391 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 RAB18Q9NP72 206 aa13.68□□□□□ -0.22
SDF4-207ENST00000494748 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 METTL21EPA6NDL7 271 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 NPIPB7O75200 414 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 SFT2D2O95562 160 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 CCL5P13501 91 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 SPEM2Q0P670 501 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 PCK2Q16822 640 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 AWAT2Q6E213 333 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 ZNF529Q6P280 563 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 POC1AQ8NBT0 407 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 FBXO17Q96EF6 278 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 RTBDNQ9BSG5 229 aaPredicted RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 TRAV20A0A0B4J274 112 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 P2RY10O00398 339 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 MFNGO00587 321 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 SCDO00767 359 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 FBXO24O75426 580 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 S100A8P05109 93 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 RPS2P15880 293 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 RAB5BP61020 215 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 CYCSP99999 105 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 TMEM196Q5HYL7 178 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 TMEM268Q5VZI3 342 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 RPL7L1Q6DKI1 246 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 PEG10Q86TG7 708 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 FRMD1Q8N878 549 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 AVL9Q8NBF6 648 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 OR5B2Q96R09 309 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 NUDT16L1Q9BRJ7 211 aaKnown RBP13.67□□□□□ -0.22
SDF4-207ENST00000494748 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
SDF4-207ENST00000494748 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms