RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 KLF14Q8TD94 323 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 SNX33Q8WV41 574 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 MARS2Q96GW9 593 aaKnown RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 C1QTNF5Q9BXJ0 243 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 AMBNQ9NP70 447 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 TAAR3PQ9P1P4 343 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 COPS3Q9UNS2 423 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 KLHDC2Q9Y2U9 406 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 PLSCR5A0PG75 271 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 H3BSA7 217 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 TIMM8AO60220 97 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF254O75437 659 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
C9orf3-219ENST00000488186 KRT8P05787 483 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 SLC2A1P11166 492 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 DBTP11182 482 aaKnown RBP13.51□□□□□ -0.25
C9orf3-219ENST00000488186 PAX1P15863 534 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ISL1P61371 349 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ACTC1P68032 377 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ACTA1P68133 377 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF91Q05481 1191 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 TESK1Q15569 626 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 ALKBH6Q3KRA9 238 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 MBNL2Q5VZF2 373 aaKnown RBP13.51□□□□□ -0.25
C9orf3-219ENST00000488186 THAP5Q7Z6K1 395 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 CMBLQ96DG6 245 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 PERPQ96FX8 193 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 PGAM5Q96HS1 289 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 OR8B4Q96RC9 309 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 LRP12Q9Y561 859 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 AKAP9Q99996 3911 aa13.51□□□□□ -0.25
C9orf3-219ENST00000488186 RTTNQ86VV8 2226 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 A0A1W2PQL4 384 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-219ENST00000488186 IRGMA1A4Y4 181 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 M0R233 179 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 ADRA2AP08913 450 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 GNAO1P09471 354 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 OTX1P32242 354 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-219ENST00000488186 MPV17P39210 176 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 EGR3Q06889 387 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 RAB40BQ12829 278 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 MST1LQ2TV78 715 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF829Q3KNS6 432 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-219ENST00000488186 C11orf71Q6IPW1 123 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 SPNS3Q6ZMD2 512 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 PLEKHG7Q6ZR37 379 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 USP51Q70EK9 711 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 FAM57BQ71RH2 274 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 PGAP1Q75T13 922 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 MRPL21Q7Z2W9 205 aaKnown RBP13.5□□□□□ -0.25
C9orf3-219ENST00000488186 LRRC75A-AS1Q8N1F1 130 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 ACBD7Q8N6N7 88 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 APH1BQ8WW43 257 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 LGALS12Q96DT0 336 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 DOK1Q99704 481 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 RAB1BQ9H0U4 201 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 MS4A5Q9H3V2 200 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 GTF2A1LQ9UNN4 478 aa13.5□□□□□ -0.25
C9orf3-219ENST00000488186 EXOGQ9Y2C4 368 aaKnown RBP13.5□□□□□ -0.25
C9orf3-219ENST00000488186 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-219ENST00000488186 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 TMEM129A0AVI4 362 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 OVOL3O00110 214 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
C9orf3-219ENST00000488186 IGHV3-13P01766 116 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 TACSTD2P09758 323 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 RAC2P15153 192 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 SELEP16581 610 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 LIPAP38571 399 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 PTH2RP49190 550 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ART1P52961 327 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ATP5J2P56134 94 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF121P58317 390 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ROM1Q03395 351 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 CDK5R2Q13319 367 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 HLXQ14774 488 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-219ENST00000488186 SNCBQ16143 134 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 SMN1Q16637 294 aaKnown RBP13.49□□□□□ -0.25
C9orf3-219ENST00000488186 TIGD6Q17RP2 521 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 MSMPQ1L6U9 139 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 COLCA1Q6ZS62 124 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 FAM220AQ7Z4H9 259 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 OR52H1Q8NGJ2 320 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 HAVCR1Q96D42 359 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 POFUT1Q9H488 388 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 CYSLTR2Q9NS75 346 aa13.49□□□□□ -0.25
C9orf3-219ENST00000488186 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 IGLV3-9A0A075B6K5 115 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 XRCC2O43543 280 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 RPP14O95059 124 aaKnown RBP13.48□□□□□ -0.25
C9orf3-219ENST00000488186 PPOXP50336 477 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 PSG7Q13046 419 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms