RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 RPS15AP62244 130 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 RPL23P62829 140 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 CACNG7P62955 275 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 COX19Q49B96 90 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 KRTAP13-2Q52LG2 175 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 MPV17L2Q567V2 206 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 TPTE2P1Q5T6R2 138 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 TWF2Q6IBS0 349 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 ZFP1Q6P2D0 407 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 CLEC2AQ6UVW9 174 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 CENPQQ7L2Z9 268 aaPredicted RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 SNX20Q7Z614 316 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 HMGN2P46Q86SG4 172 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 RNF182Q8N6D2 247 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF645Q8N7E2 425 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 TTC29Q8NA56 475 aaPredicted RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 DEDD2Q8WXF8 326 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 TIMM29Q9BSF4 260 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 GGTLC1Q9BX51 225 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 VPS37BQ9H9H4 285 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 CCNB1IP1Q9NPC3 277 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 DDX19AQ9NUU7 478 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 AHSPQ9NZD4 102 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 CLN8Q9UBY8 286 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 UBIAD1Q9Y5Z9 338 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 PTPRTO14522 1441 aa1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 COL22A1Q8NFW1 1626 aaPredicted RBP1.55□□□□□ -2.16
R3HDM1-219ENST00000488035 KCNE1BA0A087WTH5 132 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 A8MUU9 505 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 NDUFC2-KCTD14E9PQ53 114 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RPL36A-HNRNPH2H7BZ11 118 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 NME4O00746 187 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CACNG3O60359 315 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 FCN3O75636 299 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 IGLV3-25P01717 112 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 HLA-DQA1P01909 254 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 PGA4P0DJD7 388 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 PGA3P0DJD8 388 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF14P17017 642 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CELP19835 753 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 EIF2S2P20042 333 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 GSTM3P21266 225 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 USF1P22415 310 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 IL32P24001 234 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RBM34P42696 430 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RAB9AP51151 201 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CCNG1P51959 295 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TAS2R31P59538 309 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CRADDP78560 199 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 PITPNAQ00169 270 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CYP24A1Q07973 514 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF816Q0VGE8 651 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 KIR2DS1Q14954 304 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TRMT5Q32P41 509 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RNASE13Q5GAN3 156 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TCEAL5Q5H9L2 206 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TTC23LQ6PF05 361 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 IGFL1Q6UW32 110 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 SPESP1Q6UW49 350 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CBR4Q8N4T8 237 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 SNX31Q8N9S9 440 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 BPIFCQ8NFQ6 507 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 LINC01560Q8TB33 94 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TSEN15Q8WW01 171 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 TCEAL3Q969E4 200 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RPEQ96AT9 228 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 DCPSQ96C86 337 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RBBP8Q99708 897 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 HSD17B10Q99714 261 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 RTBDNQ9BSG5 229 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 ZYG11BQ9C0D3 744 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 SLIRPQ9GZT3 109 aaKnown RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 ELOVL6Q9H5J4 265 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 EXO5Q9H790 373 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF442Q9H7R0 627 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 LYRM4Q9HD34 91 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 FBXO6Q9NRD1 293 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 C20orf96Q9NUD7 363 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 CLN6Q9NWW5 311 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 SLC39A1Q9NY26 324 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 PDP1Q9P0J1 537 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 SIGLEC9Q9Y336 463 aa1.54□□□□□ -2.16
R3HDM1-219ENST00000488035 IGKV1-27A0A075B6S5 117 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 TRAV19A0A0A6YYK7 116 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 IGHV1-69DA0A0B4J2H0 117 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 WRBO00258 174 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 BCKDKO14874 412 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 SIVA1O15304 175 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 HMMRO75330 724 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 SLC22A5O76082 557 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 SEMA3DO95025 777 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 HLA-HP01893 362 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 HLA-DQB1P01920 261 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 IFNW1P05000 195 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 C1GALT1C1LP0DN25 315 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 ANXA8P13928 327 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 TUBG1P23258 451 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 HMOX2P30519 316 aa1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 POLR2IP36954 125 aaKnown RBP1.53□□□□□ -2.16
R3HDM1-219ENST00000488035 RFC3P40938 356 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms