RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 H7C417 338 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 LDLRAD4O15165 306 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 GMDSO60547 372 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 ZNF20P17024 532 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 RAB3AP20336 220 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 CCL1P22362 96 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 COMMD2Q86X83 199 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 C20orf85Q9H1P6 137 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 GHITMQ9H3K2 345 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 TAS2R8Q9NYW2 309 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 MTFP1Q9UDX5 166 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 IL17BQ9UHF5 180 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 RHBDD3Q9Y3P4 386 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 TRAV18A0A075B6X5 111 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 A0A0A6YYH2 397 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 A6NJ64 397 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 RBBP9O75884 186 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 KDM4BO94953 1096 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 ERCC1P07992 297 aaPredicted RBP17.95■□□□□ 0.46
HPS3-206ENST00000486530 SLC2A1P11166 492 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 HIST1H3AP68431 136 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 MRPS34P82930 218 aaKnown RBP17.95■□□□□ 0.46
HPS3-206ENST00000486530 PDSS1Q5T2R2 415 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 HIST2H3PS2Q5TEC6 136 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 HIST2H3AQ71DI3 136 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 SLC22A24Q8N4F4 322 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 SLC39A7Q92504 469 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 NKD1Q969G9 470 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 CPNE4Q96A23 557 aaPredicted RBP17.95■□□□□ 0.46
HPS3-206ENST00000486530 SIGLEC12Q96PQ1 595 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 UQCC2Q9BRT2 126 aa17.95■□□□□ 0.46
HPS3-206ENST00000486530 METTL17Q9H7H0 456 aaPredicted RBP17.95■□□□□ 0.46
HPS3-206ENST00000486530 ZNF703Q9H7S9 590 aaPredicted RBP17.95■□□□□ 0.46
HPS3-206ENST00000486530 CSF1P09603 554 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 RAB6AP20340 208 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 PSMB1P20618 241 aaKnown RBP17.94■□□□□ 0.46
HPS3-206ENST00000486530 STARP49675 285 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 OR1C1Q15619 314 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 DOK3Q7L591 496 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 NOXA1Q86UR1 476 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 FER1L6-AS2Q96M78 137 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 MED28Q9H204 178 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 GPR84Q9NQS5 396 aa17.94■□□□□ 0.46
HPS3-206ENST00000486530 YES1P07947 543 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 STOMP27105 288 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 PRSS3P35030 304 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 FAUP35544 74 aaKnown RBP17.93■□□□□ 0.46
HPS3-206ENST00000486530 MRPS15P82914 257 aaKnown RBP17.93■□□□□ 0.46
HPS3-206ENST00000486530 GALK2Q01415 458 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 SSBP1Q04837 148 aaKnown RBP17.93■□□□□ 0.46
HPS3-206ENST00000486530 GSG1Q2KHT4 349 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 TMEM255AQ5JRV8 349 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 FAM57BQ71RH2 274 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 PGAP1Q75T13 922 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 OR4D6Q8NGJ1 314 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 RNF170Q96K19 258 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 CNTD2Q9H8S5 307 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 CNTRLQ7Z7A1 2325 aa17.93■□□□□ 0.46
HPS3-206ENST00000486530 HPNP05981 417 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 MAB21L1Q13394 359 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 FAM27BQ5VT28 67 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 SFRP4Q6FHJ7 346 aaPredicted RBP17.92■□□□□ 0.46
HPS3-206ENST00000486530 LRRC18Q8N456 261 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 IL22RA1Q8N6P7 574 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 CLEC1AQ8NC01 280 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 OR52N4Q8NGI2 321 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 OR13C9Q8NGT0 318 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 ROBO4Q8WZ75 1007 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 OR51J1Q9H342 316 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 EMC3Q9P0I2 261 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 ZNF319Q9P2F9 582 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 SLC5A6Q9Y289 635 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 MUC6Q6W4X9 2439 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 SULT1C2O00338 296 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 PEX14O75381 377 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 ALDOBP05062 364 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 CLDN15P56746 228 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 PCGF3Q3KNV8 242 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 CCDC92Q53HC0 331 aaPredicted RBP17.92■□□□□ 0.46
HPS3-206ENST00000486530 AAED1Q7RTV5 226 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 GPR137CQ8N3F9 429 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 CAPSLQ8WWF8 208 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 GIMAP1Q8WWP7 306 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 PGAM5Q96HS1 289 aa17.92■□□□□ 0.46
HPS3-206ENST00000486530 TRAF4Q9BUZ4 470 aaPredicted RBP17.92■□□□□ 0.46
HPS3-206ENST00000486530 CDRT15L2A8MXV6 281 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 CYTIPO60759 359 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 BPNT1O95861 308 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 APOC1P02654 83 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 CD276Q5ZPR3 534 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 ASCL5Q7RTU5 278 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 DTX1Q86Y01 620 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 ZNF775Q96BV0 537 aaPredicted RBP17.91■□□□□ 0.46
HPS3-206ENST00000486530 FAM71F1Q96KD3 344 aaPredicted RBP17.91■□□□□ 0.46
HPS3-206ENST00000486530 RAB22AQ9UL26 194 aa17.91■□□□□ 0.46
HPS3-206ENST00000486530 PRAF2O60831 178 aa17.9■□□□□ 0.46
HPS3-206ENST00000486530 OTX1P32242 354 aaPredicted RBP17.9■□□□□ 0.46
HPS3-206ENST00000486530 ZNF627Q7L945 461 aa17.9■□□□□ 0.46
HPS3-206ENST00000486530 FGD2Q7Z6J4 655 aa17.9■□□□□ 0.46
HPS3-206ENST00000486530 LIX1LQ8IVB5 337 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms