RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MTNR1BP49286 362 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 PPP5CP53041 499 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 OR2B6P58173 313 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC35A1P78382 337 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 FABP5Q01469 135 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 DOC2BQ14184 412 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 OR7A5Q15622 319 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 DMKNQ6E0U4 476 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 C22orf42Q6IC83 251 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF544Q6NX49 715 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 TIGD4Q8IY51 512 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 MFSD4AQ8N468 514 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 MINDY2Q8NBR6 621 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 OR6K6Q8NGW6 343 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ACOT12Q8WYK0 555 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 WDFY2Q96P53 400 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 INTS14Q96SY0 518 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 CACNG6Q9BXT2 260 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 WDR76Q9H967 626 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 NOSIPQ9Y314 301 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 UGT2A1Q9Y4X1 527 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC25A15Q9Y619 301 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 COL6A5A8TX70 2615 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC22A23A1A5C7 686 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ISPDA4D126 451 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ANKRD61A6NGH8 418 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 OR5H1A6NKK0 313 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 C11orf98E9PRG8 122 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 MS4A18H0YCH9 400 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 M0R1B8 84 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 GABRPO00591 440 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 EIF1BO60739 113 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ARL6IP5O75915 188 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF432O94892 652 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 CDRT1O95170 752 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 VAMP5O95183 116 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 LALBAP00709 142 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TFP02787 698 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 MRPL3P09001 348 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 BMP4P12644 408 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 PYCR1P32322 319 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 OR12D2P58182 307 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SRSF2Q01130 221 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 GLO1Q04760 184 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 GABRA6Q16445 453 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 MS4A18Q3C1V0 323 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TEX30Q5JUR7 227 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SPANXN2Q5MJ10 180 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TIMM23BQ5SRD1 257 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TSPO2Q5TGU0 170 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 FBXW9Q5XUX1 488 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 MZT2AQ6P582 158 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 DTX2Q86UW9 622 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 OR6V1Q8N148 313 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ZIC4Q8N9L1 334 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 RPS4Y2Q8TD47 263 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ASB10Q8WXI3 467 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TMEM203Q969S6 136 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SMIM19Q96E16 107 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 PELI1Q96FA3 418 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TRMT61AQ96FX7 289 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 CEP19Q96LK0 163 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 ADAD1Q96M93 576 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 OXGR1Q96P68 337 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 TBX5Q99593 518 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 C6orf62Q9GZU0 229 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SMURF1Q9HCE7 757 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC7A10Q9NS82 523 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 SNTG1Q9NSN8 517 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 B9D1Q9UPM9 204 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 RASD1Q9Y272 281 aa8.16□□□□□ -1.1
TMEM39A-208ENST00000486159 IGLV1-36A0A0B4J1U3 117 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 CIB4A0PJX0 185 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 CD5LO43866 347 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 SELENOFO60613 162 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 KHDRBS3O75525 346 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 SC5DO75845 299 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 KRT8P05787 483 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 ALOX5APP20292 161 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 MYL9P24844 172 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 CD40P25942 277 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 PTBP1P26599 531 aaKnown RBP eCLIP8.15□□□□□ -1.16e-11■■■■■ 31.5
TMEM39A-208ENST00000486159 TGFBR1P36897 503 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 NAA10P41227 235 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 CSNK2A1P68400 391 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 H3F3AP84243 136 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 CDK5R1Q15078 307 aa8.15□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF181Q2M3W8 571 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms