RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SAMD4AQ9UPU9 718 aaKnown RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 MRPS18CQ9Y3D5 142 aaKnown RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 CKAP5Q14008 2032 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ADAMTSL3P82987 1691 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 SMIM35A0A1B0GVV1 85 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 NME4O00746 187 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 TNFRSF13BO14836 293 aaPredicted RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 PAK4O96013 591 aaPredicted RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 RLN2P04090 185 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 HOXA1P49639 335 aaPredicted RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 FAM3AP98173 230 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 CD164Q04900 197 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 BCL2L1Q07817 233 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 TRIP6Q15654 476 aaKnown RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 TBC1D28Q2M2D7 210 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 MEDAGQ5VYS4 303 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ZNF57Q68EA5 555 aaPredicted RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 LRRN1Q6UXK5 716 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 CASP12Q6UXS9 341 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 BLIDQ8IZY5 108 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ATPAF2Q8N5M1 289 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ZNF564Q8TBZ8 553 aaPredicted RBP6.67□□□□□ -1.34
LSM5-210ENST00000480956 GPR21Q99679 349 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 MCHR1Q99705 422 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 RARRES2Q99969 163 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 CDCA4Q9BXL8 241 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 PITPNM3Q9BZ71 974 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ACTR6Q9GZN1 396 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 CAB39LQ9H9S4 337 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 KLF12Q9Y4X4 402 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 ARL5AQ9Y689 179 aa6.67□□□□□ -1.34
LSM5-210ENST00000480956 MYO3AQ8NEV4 1616 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 ADGRB3O60242 1522 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 ZNF816-ZNF321PA0A0X1KG74 233 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 ZNF593O00488 134 aaPredicted RBP6.66□□□□□ -1.34
LSM5-210ENST00000480956 CXCR6O00574 342 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 PTPRTO14522 1441 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 MBTPS2O43462 519 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 RAD51CO43502 376 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 AQP8O94778 261 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 KRT75O95678 551 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 IFNA16P05015 189 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 EDN1P05305 212 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 RAB5AP20339 215 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 MFAP2P55001 183 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 ZNF658BQ4V348 819 aaPredicted RBP6.66□□□□□ -1.34
LSM5-210ENST00000480956 SPIN4Q56A73 249 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 FAM27D1Q5T7N8 215 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 C3orf33Q6P1S2 294 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 CREB3L2Q70SY1 520 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 CCDC71Q8IV32 467 aaPredicted RBP6.66□□□□□ -1.34
LSM5-210ENST00000480956 FAM71AQ8IYT1 594 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 HSD17B11Q8NBQ5 300 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 PRSS33Q8NF86 280 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 PAGE5Q96GU1 130 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 TMEM208Q9BTX3 173 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 REEP1Q9H902 201 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 FBXO6Q9NRD1 293 aaPredicted RBP6.66□□□□□ -1.34
LSM5-210ENST00000480956 RIMS3Q9UJD0 308 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 PPLO60437 1756 aa6.66□□□□□ -1.34
LSM5-210ENST00000480956 NOS1P29475 1434 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 CNTLNQ9NXG0 1405 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 A0A1W2PRG6 482 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 ISPDA4D126 451 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 IGLON5A6NGN9 336 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 K7EMT4 169 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 MGRN1O60291 552 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 BCHEP06276 602 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 SLC2A1P11166 492 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 HSD17B1P14061 328 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 UCHL3P15374 230 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 FUT3P21217 361 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 F8A1P23610 371 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 PSMA1P25786 263 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 SUB1P53999 127 aaKnown RBP eCLIP6.65□□□□□ -1.342e-7■■■■□ 24.9
LSM5-210ENST00000480956 RANP62826 216 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 MRPS11P82912 194 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 SLC25A11Q02978 314 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 TRIP13Q15645 432 aaPredicted RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 ZCWPW2Q504Y3 356 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 C12orf54Q6X4T0 127 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 RBMS3Q6XE24 437 aaKnown RBP6.65□□□□□ -1.34
LSM5-210ENST00000480956 CBLN2Q8IUK8 224 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 SUMF1Q8NBK3 374 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 OR10G8Q8NGN5 311 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 CRYGNQ8WXF5 182 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 TMEM56Q96MV1 263 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 NIPSNAP1Q9BPW8 284 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 PDCD1LG2Q9BQ51 273 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 UGT2B28Q9BY64 529 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 KRTAP9-4Q9BYQ2 154 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 WDR13Q9H1Z4 485 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 TRABDQ9H4I3 376 aa6.65□□□□□ -1.34
LSM5-210ENST00000480956 WDR41Q9HAD4 459 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms