RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PAX7P23759 505 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 CEACAM8P31997 349 aaPredicted RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 SLC6A9P48067 706 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 GALK2Q01415 458 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF846Q147U1 533 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 P2RY6Q15077 328 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 RTL6Q6ICC9 239 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ZNF774Q6NX45 483 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 BEND4Q6ZU67 534 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 DOK3Q7L591 496 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 OR8B12Q8NGG6 310 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ASB5Q8WWX0 329 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 BARHL1Q9BZE3 327 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 OR10A2Q9H208 303 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 PPIL3Q9H2H8 161 aaKnown RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 BRD7Q9NPI1 651 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ASF1BQ9NVP2 202 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 PLEKHB1Q9UF11 243 aaPredicted RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 FOXJ3Q9UPW0 622 aa11.21□□□□□ -0.61
VPS13D-205ENST00000473099 RP1L1Q8IWN7 2480 aaPredicted RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
VPS13D-205ENST00000473099 CIB4A0PJX0 185 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 MEGF11A6BM72 1044 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 CLDN25C9JDP6 229 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 P2RY10O00398 339 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 DVL2O14641 736 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 PIN1P1O15428 100 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 MTRF1O75570 445 aaKnown RBP11.2□□□□□ -0.62
VPS13D-205ENST00000473099 TNFSF13O75888 250 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 CLEC2LP0C7M8 214 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 HOXC12P31275 282 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 PEX19P40855 299 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 SOX2P48431 317 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 UBE2NP61088 152 aaKnown RBP11.2□□□□□ -0.62
VPS13D-205ENST00000473099 ODF4Q2M2E3 257 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 DDI2Q5TDH0 399 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 VWA1Q6PCB0 445 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 SEM1Q6ZVN7 128 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 FAM57BQ71RH2 274 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 PRSS45Q7RTY3 260 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 ZNF433Q8N7K0 673 aaPredicted RBP11.2□□□□□ -0.62
VPS13D-205ENST00000473099 OR10AC1Q8NH08 325 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 C10orf35Q96D05 121 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 CEP19Q96LK0 163 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 RGCCQ9H4X1 137 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 ZCCHC4Q9H5U6 513 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 MOV10Q9HCE1 1003 aaKnown RBP11.2□□□□□ -0.62
VPS13D-205ENST00000473099 OBP2BQ9NPH6 170 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 ZNF224Q9NZL3 707 aa11.2□□□□□ -0.62
VPS13D-205ENST00000473099 SPTA1P02549 2419 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 A0A096LPE4 126 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 A0A1W2PPZ6 126 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 DHRS7CA6NNS2 312 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 ERVH48-1M5A8F1 160 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 SLC19A2O60779 497 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 CGAP01215 116 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 IGLV3-1P01715 115 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 CD79AP11912 226 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 IGHV1-2P23083 117 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 APEX1P27695 318 aaKnown RBP11.19□□□□□ -0.62
VPS13D-205ENST00000473099 OPRM1P35372 400 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 BMXP51813 675 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 FOXG1P55316 489 aaPredicted RBP11.19□□□□□ -0.62
VPS13D-205ENST00000473099 RAB1AP62820 205 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 PPP3R1P63098 170 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 ZNF45Q02386 682 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 RSPO1Q2MKA7 263 aaPredicted RBP11.19□□□□□ -0.62
VPS13D-205ENST00000473099 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 STAC2Q6ZMT1 411 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 BTLAQ7Z6A9 289 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 DOLPP1Q86YN1 238 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 SERPINA12Q8IW75 414 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 RDH10Q8IZV5 341 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 GABRG1Q8N1C3 465 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 PARP16Q8N5Y8 322 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 OR51A4Q8NGJ6 313 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 STARD4Q96DR4 205 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 WBP1Q96G27 269 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 WDFY2Q96P53 400 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 PIGMQ9H3S5 423 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 AKIP1Q9NQ31 210 aa11.19□□□□□ -0.62
VPS13D-205ENST00000473099 ZNF275Q9NSD4 429 aaPredicted RBP11.19□□□□□ -0.62
VPS13D-205ENST00000473099 ABRACLQ9P1F3 81 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms