RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CTSEP14091 401 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 ZNF823P16415 610 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 PGCP20142 388 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 TMEM244Q5VVB8 128 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 RNF144BQ7Z419 303 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 C2CD4CQ8TF44 421 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 ADAT3Q96EY9 351 aaPredicted RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 NICN1Q9BSH3 213 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 FOXQ1Q9C009 403 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 WBP1LQ9NX94 342 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 FAM96BQ9Y3D0 163 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 SOX1O00570 391 aaPredicted RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 OR2T1O43869 369 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 IGHMP01871 453 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 NFYBP25208 207 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 CRABP1P29762 137 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 CBX5P45973 191 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 GABRA4P48169 554 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 NR0B1P51843 470 aaKnown RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 OR10R2Q8NGX6 335 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 ZNF721Q8TF20 911 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 CMSS1Q9BQ75 279 aaKnown RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 TBL1XR1Q9BZK7 514 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 NMES1Q9C002 83 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 MMP26Q9NRE1 261 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 UQCC1Q9NVA1 299 aa16.44■□□□□ 0.22
HPS3-204ENST00000462030 PHF3Q92576 2039 aaKnown RBP16.44■□□□□ 0.22
HPS3-204ENST00000462030 LINC01565O15544 149 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 ADAP1O75689 374 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 IGKV3-11P04433 115 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 SPP1P10451 314 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 RABIFP47224 123 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 SLC26A5P58743 744 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 NAAAQ02083 359 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 HOGA1Q86XE5 327 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.43■□□□□ 0.22
HPS3-204ENST00000462030 CPNE2Q96FN4 548 aaPredicted RBP16.43■□□□□ 0.22
HPS3-204ENST00000462030 TCTN2Q96GX1 697 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 SNAPINO95295 136 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 DDAH2O95865 285 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 CTHP32929 405 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 POLR2HP52434 150 aaKnown RBP16.43■□□□□ 0.22
HPS3-204ENST00000462030 FZD2Q14332 565 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 PNLIPRP3Q17RR3 467 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 TMEM200AQ86VY9 491 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 C9orf40Q8IXQ3 194 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 ZFP82Q8N141 532 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 OR4K15Q8NH41 348 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 ACKR4Q9NPB9 350 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 OR5AC2Q9NZP5 309 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 CTSFQ9UBX1 484 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 HS3ST3A1Q9Y663 406 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 SEC16AO15027 2179 aa16.43■□□□□ 0.22
HPS3-204ENST00000462030 A8MVM7 634 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 ZNF705EA8MWA4 302 aaPredicted RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 ALG1L2C9J202 215 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 ZNF217O75362 1048 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 H2BFMP0C1H6 154 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 HSD11B1P28845 292 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 OR1D4P47884 311 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 KCNJ3P48549 501 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 PPM1FP49593 454 aaPredicted RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 SLC9A3R2Q15599 337 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SGCAQ16586 387 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 COL13A1Q5TAT6 717 aaPredicted RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 COX15Q7KZN9 410 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 OR1M1Q8NGA1 313 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 OR13C9Q8NGT0 318 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 TMEM230Q96A57 120 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SPACA5Q96QH8 159 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 IFT22Q9H7X7 185 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 BIN3Q9NQY0 253 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SOHLH2Q9NX45 425 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SPTBN5Q9NRC6 3674 aaKnown RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 TSPAN2O60636 221 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 FARS2O95363 451 aaKnown RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 BPNT1O95861 308 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 TTRP02766 147 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 CRYBA1P05813 215 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 CX3CR1P49238 355 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 EFNA3P52797 238 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 PLCXD2Q0VAA5 305 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 EBPQ15125 230 aaKnown RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.42■□□□□ 0.22
HPS3-204ENST00000462030 RXFP4Q8TDU9 374 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 GPR119Q8TDV5 335 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SEC11CQ9BY50 192 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 HRH4Q9H3N8 390 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 OR2S2Q9NQN1 319 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 ZFP57Q9NU63 452 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 ATPIF1Q9UII2 106 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 SLCO1B1Q9Y6L6 691 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 PCDH15Q96QU1 1955 aa16.42■□□□□ 0.22
HPS3-204ENST00000462030 AHSA1O95433 338 aa16.41■□□□□ 0.22
HPS3-204ENST00000462030 SEMA4FO95754 770 aa16.41■□□□□ 0.22
HPS3-204ENST00000462030 IGHV4-34P06331 123 aa16.41■□□□□ 0.22
HPS3-204ENST00000462030 PI3P19957 117 aa16.41■□□□□ 0.22
HPS3-204ENST00000462030 PJVKQ0ZLH3 352 aa16.41■□□□□ 0.22
HPS3-204ENST00000462030 GFOD2Q3B7J2 385 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms