RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 KITLGP21583 273 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-211ENST00000449704 LIPAP38571 399 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 RCN1Q15293 331 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 PCGF3Q3KNV8 242 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 OR2T2Q6IF00 324 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 FBXW12Q6X9E4 464 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-211ENST00000449704 GID4Q8IVV7 300 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 OR8J1Q8NGP2 316 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 MBOAT4Q96T53 435 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 CNN2Q99439 309 aaKnown RBP13.4□□□□□ -0.26
TOP3B-211ENST00000449704 SMR3AQ99954 134 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 PIMREGQ9BSJ6 248 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 DECR2Q9NUI1 292 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 KLHDC2Q9Y2U9 406 aa13.4□□□□□ -0.26
TOP3B-211ENST00000449704 ZSCAN5BA6NJL1 495 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 IGHV1-46P01743 117 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 ANXA2P07355 339 aaKnown RBP13.39□□□□□ -0.27
TOP3B-211ENST00000449704 ANPEPP15144 967 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 SLC25A16P16260 332 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 COL8A2P25067 703 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 OPRL1P41146 370 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 CX3CR1P49238 355 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 PRSS12P56730 875 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 TRIP10Q15642 601 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 LRRC36Q1X8D7 754 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 SNAI3Q3KNW1 292 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 ZMAT1Q5H9K5 638 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 RDH5Q92781 318 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 HRASLS5Q96KN8 279 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 GSX1Q9H4S2 264 aaPredicted RBP13.39□□□□□ -0.27
TOP3B-211ENST00000449704 BRD7Q9NPI1 651 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 MED13LQ71F56 2210 aa13.39□□□□□ -0.27
TOP3B-211ENST00000449704 CSPG4Q6UVK1 2322 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 C5orf63A6NC05 138 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 NDUFS8O00217 210 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 TBX1O43435 398 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 CDC14BO60729 498 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 APOC1P02654 83 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 ALOX5APP20292 161 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 GGTLC2Q14390 218 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 GK2Q14410 553 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-211ENST00000449704 LRRN1Q6UXK5 716 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 USP51Q70EK9 711 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 PGAP1Q75T13 922 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 MRPL21Q7Z2W9 205 aaKnown RBP13.38□□□□□ -0.27
TOP3B-211ENST00000449704 KRT77Q7Z794 578 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 BIVMQ86UB2 503 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 GALNT4Q8N4A0 578 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 BHLHE23Q8NDY6 225 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 OR2AE1Q8NHA4 323 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 ZNF582Q96NG8 517 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-211ENST00000449704 NKIRAS2Q9NYR9 191 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 CGGBP1Q9UFW8 167 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-211ENST00000449704 ZDHHC8Q9ULC8 765 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 TMEM14AQ9Y6G1 99 aa13.38□□□□□ -0.27
TOP3B-211ENST00000449704 SELEP16581 610 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 ANOS1P23352 680 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 NR4A2P43354 598 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 ZNF92Q03936 586 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 CDK5R2Q13319 367 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 FAM209AQ5JX71 171 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 GLYATL3Q5SZD4 288 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 KCTD18Q6PI47 426 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-211ENST00000449704 Q6ZR03 302 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 FAM57BQ71RH2 274 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 SLC35F2Q8IXU6 374 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 ZNF540Q8NDQ6 660 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 OR51G2Q8NGK0 314 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 TRUB1Q8WWH5 349 aaKnown RBP13.37□□□□□ -0.27
TOP3B-211ENST00000449704 ELMOD3Q96FG2 381 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 EGLN1Q9GZT9 426 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 SP140LQ9H930 580 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 SAP30LQ9HAJ7 183 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
TOP3B-211ENST00000449704 COPS3Q9UNS2 423 aa13.37□□□□□ -0.27
TOP3B-211ENST00000449704 PSMD9O00233 223 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 APOL3O95236 402 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-211ENST00000449704 TNFSF4P23510 183 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 HTR1FP30939 366 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 ZNF121P58317 390 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-211ENST00000449704 TNFAIP6P98066 277 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-211ENST00000449704 CLEC9AQ6UXN8 241 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 SPRYD4Q8WW59 207 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-211ENST00000449704 ASB17Q8WXJ9 295 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 RFKQ969G6 155 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 YIPF5Q969M3 257 aa13.36□□□□□ -0.27
TOP3B-211ENST00000449704 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms