RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SULT1A3P0DMM9 295 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 SULT1A4P0DMN0 295 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 PITPNAQ00169 270 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 CAMK2DQ13557 499 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 EXOSC2Q13868 293 aaKnown RBP12.78□□□□□ -0.36
SGCE-202ENST00000415788 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 FBXW9Q5XUX1 488 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 FAM122CQ6P4D5 195 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 TMEM65Q6PI78 240 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 SHFQ7M4L6 423 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 C20orf196Q8IYI0 205 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 Q96M85 177 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 ALG12Q9BV10 488 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 PPA2Q9H2U2 334 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 JKAMPQ9P055 326 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 H2AFY2Q9P0M6 372 aaPredicted RBP12.78□□□□□ -0.36
SGCE-202ENST00000415788 RABL2AQ9UBK7 228 aaPredicted RBP12.78□□□□□ -0.36
SGCE-202ENST00000415788 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 GPR52Q9Y2T5 361 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 MAB21L2Q9Y586 359 aa12.78□□□□□ -0.36
SGCE-202ENST00000415788 DOCK7Q96N67 2140 aa12.77□□□□□ -0.36
SGCE-202ENST00000415788 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 A8MXE2 369 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 EEF1E1-BLOC1S5C9J1V9 151 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 PYCARD-AS1I3L0S3 204 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 EEF1E1O43324 174 aaKnown RBP12.77□□□□□ -0.37
SGCE-202ENST00000415788 LANCL1O43813 399 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 ZG16O60844 167 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 KRT33AO76009 404 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 AGFG2O95081 481 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 PGA4P0DJD7 388 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 PGA3P0DJD8 388 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 DNASE1P24855 282 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 CLRN1P58418 232 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 GALEQ14376 348 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 TSPO2Q5TGU0 170 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 BAIAP2L2Q6UXY1 529 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 Q6ZT83 130 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 GPR137CQ8N3F9 429 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 RELL2Q8NC24 303 aaPredicted RBP12.77□□□□□ -0.37
SGCE-202ENST00000415788 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 OR4F15Q8NGB8 312 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 OR11H4Q8NGC9 324 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 OR6N1Q8NGY5 312 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.37
SGCE-202ENST00000415788 LRRC46Q96FV0 321 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 MRPL13Q9BYD1 178 aaKnown RBP12.77□□□□□ -0.37
SGCE-202ENST00000415788 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 FOXD3Q9UJU5 478 aaPredicted RBP12.77□□□□□ -0.37
SGCE-202ENST00000415788 NPTNQ9Y639 398 aa12.77□□□□□ -0.37
SGCE-202ENST00000415788 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 IFNGP01579 166 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
SGCE-202ENST00000415788 THBS2P35442 1172 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 CAPZA2P47755 286 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ASCL1P50553 236 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
SGCE-202ENST00000415788 MESTQ5EB52 335 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 CARD17Q5XLA6 110 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 JAZF1Q86VZ6 243 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 KLBQ86Z14 1044 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 GID4Q8IVV7 300 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 OR4Q3Q8NH05 313 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 DPCDQ9BVM2 203 aaPredicted RBP12.76□□□□□ -0.37
SGCE-202ENST00000415788 OPN3Q9H1Y3 402 aaPredicted RBP12.76□□□□□ -0.37
SGCE-202ENST00000415788 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ELOVL5Q9NYP7 299 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ZNF224Q9NZL3 707 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 KIF25Q9UIL4 384 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 MED12LQ86YW9 2145 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 WIPF3A6NGB9 483 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 J3QRE1 110 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 TSPAN9O75954 239 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 ZNF250P15622 560 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 P2RY6Q15077 328 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 STK11Q15831 433 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 HIST3H3Q16695 136 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 SAMD12Q8N8I0 201 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 RASD2Q96D21 266 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 RBP7Q96R05 134 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 GSX2Q9BZM3 304 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 KCNJ16Q9NPI9 418 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 CMC2Q9NRP2 79 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
SGCE-202ENST00000415788 PRSS50Q9UI38 385 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms