RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 EFNB2P52799 333 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 DBPQ10586 325 aaPredicted RBP12.3□□□□□ -0.44
SEC13-206ENST00000397102 OR8B8Q15620 311 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 MESTQ5EB52 335 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 OTPQ5XKR4 325 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 COLCA1Q6ZS62 124 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 OAFQ86UD1 273 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 GLB1L2Q8IW92 636 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 BOLLQ8N9W6 283 aaKnown RBP12.3□□□□□ -0.44
SEC13-206ENST00000397102 SPERTQ8NA61 448 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 SGCDQ92629 289 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 COQ7Q99807 217 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 HDHD2Q9H0R4 259 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 PPA2Q9H2U2 334 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 CNTD2Q9H8S5 307 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 NKIRAS1Q9NYS0 192 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 RPUSD1Q9UJJ7 312 aaKnown RBP12.3□□□□□ -0.44
SEC13-206ENST00000397102 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 DVL1O14640 695 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 KHDRBS3O75525 346 aaKnown RBP12.29□□□□□ -0.44
SEC13-206ENST00000397102 PTBP3O95758 552 aaKnown RBP12.29□□□□□ -0.44
SEC13-206ENST00000397102 OR1E2P47887 323 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 SLC9A3P48764 834 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 PRSS12P56730 875 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
SEC13-206ENST00000397102 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 Q96M85 177 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 C7orf26Q96N11 449 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 RABEP2Q9H5N1 569 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 FOXJ3Q9UPW0 622 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 COA3Q9Y2R0 106 aaPredicted RBP12.29□□□□□ -0.44
SEC13-206ENST00000397102 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
SEC13-206ENST00000397102 ADAM18Q9Y3Q7 739 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 NOTCH3Q9UM47 2321 aa12.29□□□□□ -0.44
SEC13-206ENST00000397102 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 ANGPT2O15123 496 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 SLC16A7O60669 478 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 GYPAP02724 150 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 CD14P08571 375 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 EEF1B2P24534 225 aaKnown RBP12.28□□□□□ -0.44
SEC13-206ENST00000397102 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
SEC13-206ENST00000397102 HIST1H3AP68431 136 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 PRKCDQ05655 676 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 NFYCQ13952 458 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 OR8G1Q15617 311 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 HIST2H3AQ71DI3 136 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 FAM122BQ7Z309 247 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 NRMQ8IXM6 262 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 ST8SIA4Q92187 359 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 PRRC1Q96M27 445 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 DMRTB1Q96MA1 342 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 SIGLEC9Q9Y336 463 aa12.28□□□□□ -0.44
SEC13-206ENST00000397102 DNAH3Q8TD57 4116 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 NPFFO15130 113 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 PAHP00439 452 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 VSIG8P0DPA2 414 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 IFNA8P32881 189 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.45
SEC13-206ENST00000397102 RSPO1Q2MKA7 263 aaPredicted RBP12.27□□□□□ -0.45
SEC13-206ENST00000397102 C1orf122Q6ZSJ8 110 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 KLHDC1Q8N7A1 406 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 LY6G5BQ8NDX9 201 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 OR4S1Q8NGB4 309 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
SEC13-206ENST00000397102 PHF21AQ96BD5 680 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 RERGLQ9H628 205 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 SIRT7Q9NRC8 400 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 ONECUT1Q9UBC0 465 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 LHFPL6Q9Y693 200 aa12.27□□□□□ -0.45
SEC13-206ENST00000397102 GMDSO60547 372 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 IFNA14P01570 189 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 ACSM4P0C7M7 580 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 CA6P23280 308 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 MALLQ13021 153 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 PGM2L1Q6PCE3 622 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 CALHM3Q86XJ0 350 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 CMTM4Q8IZR5 234 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 GCSAMQ8N6F7 178 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 SLCO4A1Q96BD0 722 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 ADAT1Q9BUB4 502 aaKnown RBP12.26□□□□□ -0.45
SEC13-206ENST00000397102 NMNAT1Q9HAN9 279 aaPredicted RBP12.26□□□□□ -0.45
SEC13-206ENST00000397102 VSX1Q9NZR4 365 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms