RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MPIG6BO95866 241 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 S100A9P06702 114 aaKnown RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 RAB32Q13637 225 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ALG11Q2TAA5 492 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 FAM76BQ5HYJ3 339 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 DHRS7BQ6IAN0 325 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 hCG_1809904A0A1W2PP81 198 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 A0A1W2PR64 198 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 A0A1W2PRV1 198 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 PRSS37A4D1T9 235 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 RAB27BO00194 218 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 SCGB1D2O95969 90 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 PNMTP11086 282 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 GPR3P46089 330 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF117Q03924 483 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 SKP2Q13309 424 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 UNC119Q13432 240 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ARMC6Q6NXE6 501 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 C16orf47Q6ZP98 133 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 PPP1R3BQ86XI6 285 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 GPX7Q96SL4 187 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF587Q96SQ5 575 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF304Q9HCX3 659 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 A6NLC8 198 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 RAB6AP20340 208 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 OR1D4P47884 311 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 HABP2Q14520 560 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-203ENST00000395060 FAM166AQ6J272 317 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 UQCC3Q6UW78 93 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF813Q6ZN06 617 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 PHYHIPLQ96FC7 376 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 SULT4A1Q9BR01 284 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 UBQLN4Q9NRR5 601 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 MED29Q9NX70 200 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 OR52A1Q9UKL2 312 aa12.79□□□□□ -0.36
CLIP2-203ENST00000395060 A0A0J9YY10 115 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 TTLL8A6PVC2 850 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 CD74P04233 296 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ARG1P05089 322 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ABOP16442 354 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 RORAP35398 523 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 CEBPGP53567 150 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 MST1LQ2TV78 715 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 SHISA6Q6ZSJ9 500 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 TSLPQ969D9 159 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 RNASEK-C17orf49H0YIS7 233 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 CLDN4O14493 209 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 TNFSF14O43557 240 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 HOXB2P14652 356 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 NQO2P16083 231 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ITGA3P26006 1051 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 PJVKQ0ZLH3 352 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ADAM5Q6NVV9 412 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 KCTD18Q6PI47 426 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ANGPTL5Q86XS5 388 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-203ENST00000395060 TMEM104Q8NE00 496 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
CLIP2-203ENST00000395060 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 SOCS1O15524 211 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 PLRG1O43660 514 aaKnown RBP12.77□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF823P16415 610 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF14P17017 642 aaPredicted RBP12.77□□□□□ -0.36
CLIP2-203ENST00000395060 GLRA1P23415 457 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 PPICP45877 212 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 CLDN6P56747 220 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 RAB5BP61020 215 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 NFATC4Q14934 902 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 RSPO4Q2I0M5 234 aaPredicted RBP12.77□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF260Q3ZCT1 412 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 SLC43A2Q8N370 569 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 ADAT3Q96EY9 351 aaPredicted RBP12.77□□□□□ -0.36
CLIP2-203ENST00000395060 EDEM2Q9BV94 578 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 GHRLQ9UBU3 117 aa12.77□□□□□ -0.36
CLIP2-203ENST00000395060 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
CLIP2-203ENST00000395060 NDUFS6O75380 124 aaKnown RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-203ENST00000395060 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms