RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PFDN5Q99471 154 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 KLHDC3Q9BQ90 382 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 POLR2J2Q9GZM3 115 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 NXF2Q9GZY0 626 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 POLR2J3Q9H1A7 115 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 OR51E2Q9H255 320 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ARRDC1-AS1Q9H2J1 176 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 NCOA1Q15788 1441 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 EFCAB10A6NFE3 127 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 NKX6-3A6NJ46 265 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 P2RX6O15547 441 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 RAD51CO43502 376 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 CCDC22O60826 627 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 VAMP5O95183 116 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ORM1P02763 201 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 EGR2P11161 476 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 COX5AP20674 150 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 PSMA1P25786 263 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 NBL1P41271 181 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 OR3A4PP47883 348 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 PAX9P55771 341 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 GPX6P59796 221 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 TSNQ15631 228 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 ATAD3CQ5T2N8 411 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 HES5Q5TA89 166 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 LRRN1Q6UXK5 716 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 FLYWCH2Q96CP2 140 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 C10orf90Q96M02 699 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ZNF300Q96RE9 604 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 PPP4R1LQ9P1A2 415 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 STOX2Q9P2F5 926 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 SHANK2Q9UPX8 1470 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 NHSL1Q5SYE7 1610 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 TGIF2-C20orf24A0A0A6YYL0 155 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 IGHV4-28A0A0C4DH34 117 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 FAM240AA0A1B0GVK7 77 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ZNF99A8MXY4 864 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 F8VP50 259 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 FZD7O75084 574 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 KCNJ3P48549 501 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ACOT2P49753 483 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 TAS2R31P59538 309 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ASAH1Q13510 395 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ZNF57Q68EA5 555 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 SLC25A47Q6Q0C1 308 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 Q6ZSR9 355 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 GVQW1Q8N7I0 195 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 C8orf31Q8N9H6 132 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 OR13G1Q8NGZ3 307 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 DUS3LQ96G46 650 aaKnown RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 SCMH1Q96GD3 660 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 P2RX4Q99571 388 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 S100A13Q99584 98 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 DOK1Q99704 481 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 ZNF717Q9BY31 904 aaPredicted RBP3.06□□□□□ -1.92
XRN1-202ENST00000392981 ANGPTL4Q9BY76 406 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 HRASLSQ9HDD0 168 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 PRSS16Q9NQE7 514 aa3.06□□□□□ -1.92
XRN1-202ENST00000392981 SYCP2Q9BX26 1530 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 FHOD3Q2V2M9 1422 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 A6NIZ1 184 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 NUPL2O15504 423 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 HPP00738 406 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 PCCAP05165 728 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 EDN1P05305 212 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 IGHV4-31P0DP07 118 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RAB5AP20339 215 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 EFNA1P20827 205 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 PSMB9P28065 219 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 IDH2P48735 452 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 VSX2P58304 361 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 RAP1BP61224 184 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SRSF1Q07955 248 aaKnown RBP eCLIP3.05□□□□□ -1.92
XRN1-202ENST00000392981 ZNF773Q6PK81 442 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 XKRXQ6PP77 449 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TAC4Q86UU9 113 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OR6T1Q8NGN1 323 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 GEMIN6Q8WXD5 167 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 MRPL48Q96GC5 212 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 TMED9Q9BVK6 235 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MAP1LC3AQ9H492 121 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 NUDT4Q9NZJ9 180 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DNAJC12Q9UKB3 198 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 V9GY05 133 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 BCL9O00512 1426 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ZNF532Q9HCE3 1301 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 NBPF19A0A087WUL8 3843 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 UGGT1Q9NYU2 1555 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MSH6P52701 1360 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 IGLV9-49A0A0B4J1Y8 123 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 A0A1W2PP11 408 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 FTCDNL1E5RQL4 147 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MKRN2OSH3BPM6 223 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 HSD17B6O14756 317 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 CDK2AP2O75956 126 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 WISP2O76076 250 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ANOS1P23352 680 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MAS1LP35410 378 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 GGT2P36268 569 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms