RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 RHOVQ96L33 236 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 VN1R3Q9BXE9 311 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 DEFB126Q9BYW3 111 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 GPR173Q9NS66 373 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 H0YGG7 62 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 DDAH2O95865 285 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 TPPP2P59282 170 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 PPIAP62937 165 aaKnown RBP11.54□□□□□ -0.56
GPC4-201ENST00000370828 ZNF66Q6ZN08 573 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 ZNF429Q86V71 674 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 PSMF1Q92530 271 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 GABRQQ9UN88 632 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
GPC4-201ENST00000370828 E5RGE8 158 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 TGM5O43548 720 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 NTF3P20783 257 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 MSX1P28360 303 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 DUSP1P28562 367 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 AADACL3Q5VUY0 350 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 RNLSQ5VYX0 342 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 HTR3DQ70Z44 454 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 TMEM229BQ8NBD8 167 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 OR13D1Q8NGV5 346 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 PIGCQ92535 297 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 SMIM7Q9BQ49 75 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 NSG2Q9Y328 171 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 KCNE3Q9Y6H6 103 aa11.54□□□□□ -0.56
GPC4-201ENST00000370828 MBTPS2O43462 519 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 TTRP02766 147 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 AADACP22760 399 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 KIR2DS3Q14952 304 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
GPC4-201ENST00000370828 OR51A2Q8NGJ7 313 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 OR8U1Q8NH10 309 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 SEH1LQ96EE3 360 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 REEP6Q96HR9 211 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 ANKRD20A5PA0PJZ0 165 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 FAM166BA8MTA8 275 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 M0R2Z0 102 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 BCKDHBP21953 392 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 GALP22466 123 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
GPC4-201ENST00000370828 HHEXQ03014 270 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 PRAMEF20Q5VT98 475 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 ZNF547Q8IVP9 402 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 PACRGQ96M98 296 aaPredicted RBP11.53□□□□□ -0.56
GPC4-201ENST00000370828 ZCCHC4Q9H5U6 513 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 HCFC1R1Q9NWW0 138 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 HS3ST2Q9Y278 367 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 IDSB3KWA1 339 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 RAB27BO00194 218 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 HLA-DOBP13765 273 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 CD22P20273 847 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 CCKARP32238 428 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 SLC7A9P82251 487 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 PLCXD3Q63HM9 321 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 MOB3CQ70IA8 216 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 PUSL1Q8N0Z8 303 aaKnown RBP11.53□□□□□ -0.56
GPC4-201ENST00000370828 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 TP53I11O14683 189 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 SRPXP78539 464 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 LAIR2Q6ISS4 152 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 C12orf76Q8N812 135 aaPredicted RBP11.53□□□□□ -0.56
GPC4-201ENST00000370828 WNT2BQ93097 391 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
GPC4-201ENST00000370828 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 ASCL1P50553 236 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 ERVFRD-1P60508 538 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 AARDQ4LEZ3 155 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 THNSL2Q86YJ6 484 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 LYSMD1Q96S90 227 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 JAM3Q9BX67 310 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.56
GPC4-201ENST00000370828 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 TRBV5-3A0A0A0MS03 114 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 ACKR1Q16570 336 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 SHISA6Q6ZSJ9 500 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 ANKRD9Q96BM1 317 aaPredicted RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 NAA11Q9BSU3 229 aaPredicted RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 FLVCR1Q9Y5Y0 555 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 ZFPL1O95159 310 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 CST4P01036 141 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 BSGP35613 385 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 CSNK1A1P48729 337 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 RAE1P78406 368 aaKnown RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
GPC4-201ENST00000370828 TMEM128Q5BJH2 165 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 USP53Q70EK8 1073 aa11.52□□□□□ -0.57
GPC4-201ENST00000370828 WDR5BQ86VZ2 330 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms