RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 MRPS2Q9Y399 296 aaKnown RBP12.74□□□□□ -0.37
RLIM-202ENST00000349225 CTXN1P60606 82 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 RSU1Q15404 277 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 RNF44Q7L0R7 432 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 FAM46BQ96A09 425 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 MUCL1Q96DR8 90 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 SMIM3Q9BZL3 60 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 POLE3Q9NRF9 147 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 SLC5A6Q9Y289 635 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
RLIM-202ENST00000349225 S100A2P29034 98 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 NPY4RP50391 375 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 ZNF84P51523 738 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 CYCSP99999 105 aaKnown RBP12.74□□□□□ -0.37
RLIM-202ENST00000349225 SRSF5Q13243 272 aaKnown RBP12.74□□□□□ -0.37
RLIM-202ENST00000349225 JAGN1Q8N5M9 183 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 SSX3Q99909 188 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 KLHDC3Q9BQ90 382 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 FBXL21Q9UKT6 434 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 DAPP1Q9UN19 280 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
RLIM-202ENST00000349225 SLC26A5P58743 744 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 PCK2Q16822 640 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 MED25Q71SY5 747 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 SFTPA1Q8IWL2 248 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 OR1J1Q8NGS3 322 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 CDC6Q99741 560 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 FBXL17Q9UF56 701 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 ZNF726A6NNF4 738 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 OR2C1O95371 312 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 TIMP1P01033 207 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 OR13C7P0DN81 318 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 ZNF708P17019 499 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 LMO1P25800 156 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 CRABP1P29762 137 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 ADPRHP54922 357 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 S100A10P60903 97 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 RHEBQ15382 184 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 FDX2Q6P4F2 183 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 OTOSQ8NHW6 89 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 CD300LFQ8TDQ1 290 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 GAL3ST3Q96A11 431 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 MVB12AQ96EY5 273 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 RAB18Q9NP72 206 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 DHDHQ9UQ10 334 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 CACNA1IQ9P0X4 2223 aa12.73□□□□□ -0.37
RLIM-202ENST00000349225 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 ZNF264O43296 627 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 ZNF217O75362 1048 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 F10P00742 488 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 CHAF1BQ13112 559 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 DHCR24Q15392 516 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 RNF144BQ7Z419 303 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 OR5T3Q8NGG3 340 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 SLC25A44Q96H78 314 aaPredicted RBP12.72□□□□□ -0.37
RLIM-202ENST00000349225 RTBDNQ9BSG5 229 aaPredicted RBP12.72□□□□□ -0.37
RLIM-202ENST00000349225 EIF5A2Q9GZV4 153 aaKnown RBP12.72□□□□□ -0.37
RLIM-202ENST00000349225 GSKIPQ9P0R6 139 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 SFT2D2O95562 160 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 TSPAN15O95858 294 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 CST4P01036 141 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 GPR18Q14330 331 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 C5orf24Q7Z6I8 188 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 ZNF615Q8N8J6 731 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 Q8WTZ3 238 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 ERGIC1Q969X5 290 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 OR8B4Q96RC9 309 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 GPR132Q9UNW8 380 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 HIF3AQ9Y2N7 669 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 FBXO7Q9Y3I1 522 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 SPEGQ15772 3267 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
RLIM-202ENST00000349225 PRPS1P60891 318 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 RAP1AP62834 184 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 ITPRIPL2Q3MIP1 535 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 INTS14Q96SY0 518 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 LMAN2LQ9H0V9 348 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
RLIM-202ENST00000349225 INSL6Q9Y581 213 aa12.72□□□□□ -0.37
RLIM-202ENST00000349225 HRKO00198 91 aa12.71□□□□□ -0.37
RLIM-202ENST00000349225 NKX2-2O95096 273 aa12.71□□□□□ -0.37
RLIM-202ENST00000349225 RPS2P15880 293 aaKnown RBP12.71□□□□□ -0.37
RLIM-202ENST00000349225 GABRA4P48169 554 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms