RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 A0A1W2PPW3 197 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 PLSCR5A0PG75 271 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 GPRIN2O60269 458 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 DBHP09172 617 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 ZNF250P15622 560 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 GABRB1P18505 474 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 CD53P19397 219 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 OTX1P32242 354 aaPredicted RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 OPRL1P41146 370 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 WNT5AP41221 380 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 PRKXP51817 358 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 CXCR4P61073 352 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 CSNK2BP67870 215 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 EGR3Q06889 387 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 MAD2L1BPQ15013 274 aaPredicted RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 NKPD1Q17RQ9 610 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 ZMAT1Q5H9K5 638 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 MBNL2Q5VZF2 373 aaKnown RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 ZNF322Q6U7Q0 402 aaPredicted RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 THAP5Q7Z6K1 395 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 ZNF679Q8IYX0 411 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 SNX33Q8WV41 574 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 TRAF4Q9BUZ4 470 aaPredicted RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 C1QTNF5Q9BXJ0 243 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 OR2J1Q9GZK6 312 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 DYNLRB1Q9NP97 96 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 CYSLTR2Q9NS75 346 aa10.18□□□□□ -0.78
SNCA-202ENST00000345009 CGGBP1Q9UFW8 167 aaPredicted RBP10.18□□□□□ -0.78
SNCA-202ENST00000345009 ACOD1A6NK06 481 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 M0R233 179 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 NGFP01138 241 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 CD8AP01732 235 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 KRT8P05787 483 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ANXA2P07355 339 aaKnown RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 TACSTD2P09758 323 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RAC2P15153 192 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 SELEP16581 610 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 CFL1P23528 166 aaKnown RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 DCTDP32321 178 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 CX3CR1P49238 355 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RIDAP52758 137 aaKnown RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 HCCSP53701 268 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 AQP4P55087 323 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ISL1P61371 349 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ROM1Q03395 351 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RAB40BQ12829 278 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 MED21Q13503 144 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 SWI5Q1ZZU3 235 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RSPO1Q2MKA7 263 aaPredicted RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 DEFB113Q30KQ7 82 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ZNF829Q3KNS6 432 aaPredicted RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 KRTAP27-1Q3LI81 207 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ARSJQ5FYB0 599 aaPredicted RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 PLEKHG7Q6ZR37 379 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 COLCA1Q6ZS62 124 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RFPL4BQ6ZWI9 263 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 KCTD20Q7Z5Y7 419 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 ACBD7Q8N6N7 88 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 OR10S1Q8NGN2 331 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 SLC25A40Q8TBP6 338 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 KLF14Q8TD94 323 aaPredicted RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 MARS2Q96GW9 593 aaKnown RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 DOK1Q99704 481 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 SYT3Q9BQG1 590 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 RAB1BQ9H0U4 201 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 OR10A2Q9H208 303 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 Q9H521 79 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 OPA3Q9H6K4 179 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 BARX1Q9HBU1 254 aaPredicted RBP10.17□□□□□ -0.78
SNCA-202ENST00000345009 INPP5EQ9NRR6 644 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 STARD10Q9Y365 291 aa10.17□□□□□ -0.78
SNCA-202ENST00000345009 MYO9AB2RTY4 2548 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 DAPL1A0PJW8 107 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 H7C417 338 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 OVOL3O00110 214 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 XRCC2O43543 280 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 SULT1C4O75897 302 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 CLIC3O95833 236 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 IGHV3-13P01766 116 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 DBTP11182 482 aaKnown RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 PAX1P15863 534 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 PPOXP50336 477 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 ZNF91Q05481 1191 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 SNCBQ16143 134 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 SPATA46Q5T0L3 261 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 C6orf52Q5T4I8 152 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 LRRN1Q6UXK5 716 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 FBXW12Q6X9E4 464 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 PGAP1Q75T13 922 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 FAM220AQ7Z4H9 259 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 EGFL6Q8IUX8 553 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 LRRC75A-AS1Q8N1F1 130 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 ITFG2Q969R8 447 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 HAVCR1Q96D42 359 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 PGAM5Q96HS1 289 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 OR8B4Q96RC9 309 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms