RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR8B12Q8NGG6 310 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ELP5Q8TE02 316 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC6A7Q99884 636 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 FANCFQ9NPI8 374 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF319Q9P2F9 582 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 TP53I11O14683 189 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 DKK1O94907 266 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 OR4E1P0C645 316 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 VSIG8P0DPA2 414 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 CCL3P10147 92 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB14P61106 215 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SSBP1Q04837 148 aaKnown RBP13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SGCAQ16586 387 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 RAET1LQ5VY80 246 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 EDAQ92838 391 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 PNPLA2Q96AD5 504 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 FOXRED1Q96CU9 486 aaPredicted RBP13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC26A1Q9H2B4 701 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 GPR84Q9NQS5 396 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB22AQ9UL26 194 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 ARPC4-TTLL3A0A0A6YYG9 625 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 A0A1B0GTI1 187 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 I3L521 148 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB27BO00194 218 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 UMODP07911 640 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 AP2S1P53680 142 aaPredicted RBP13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 SEC61A1P61619 476 aaKnown RBP13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 UPB1Q9UBR1 384 aa13.19□□□□□ -0.3
VIPAS39-202ENST00000343765 KLK3P07288 261 aaPredicted RBP13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 CD37P11049 281 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF93P35789 620 aaPredicted RBP13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 CX3CR1P49238 355 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 SORDQ00796 357 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF283Q8N7M2 679 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 FADS6Q8N9I5 356 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 OR6X1Q8NH79 312 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 NICN1Q9BSH3 213 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 D6RAR5 112 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF735P0CB33 412 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF260Q3ZCT1 412 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ATPAF1Q5TC12 328 aaPredicted RBP13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 C3P1Q6ZMU1 363 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 AQP3Q92482 292 aa13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF230Q9UIE0 474 aaPredicted RBP13.18□□□□□ -0.3
VIPAS39-202ENST00000343765 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 C5orf63A6NC05 138 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 AQP7P3A6NL99 342 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 WDPCPO95876 746 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 FGF5P12034 268 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 CXADRP78310 365 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 DHODHQ02127 395 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 CLLU1Q5K131 121 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 OR13C8Q8NGS7 320 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 CCDC107Q8WV48 283 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 ONECUT2O95948 504 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 HCKP08631 526 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB6AP20340 208 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 OR3A4PP47883 348 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 RNASE10Q5GAN6 216 aaKnown RBP13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 TMPPEQ6ZT21 453 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 CCDC28AQ8IWP9 274 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 ADPRHL1Q8NDY3 354 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 NPRL2Q8WTW4 380 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF775Q96BV0 537 aaPredicted RBP13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 BANF2Q9H503 90 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
VIPAS39-202ENST00000343765 A0A0A6YYH2 397 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 A6NJ64 397 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 MPIG6BO95866 241 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 C4BPBP20851 252 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 LIN54Q6MZP7 749 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 GLIPR1L1Q6UWM5 242 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
VIPAS39-202ENST00000343765 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms