RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SERPINA5P05154 406 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 RNF224P0DH78 156 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF83P51522 516 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 KRTAP27-1Q3LI81 207 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 CCDC58Q4VC31 144 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 TMEM91Q6ZNR0 172 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 OR5AK2Q8NH90 309 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 LILRB4Q8NHJ6 448 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 RPS4Y2Q8TD47 263 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ISOC1Q96CN7 298 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 COQ7Q99807 217 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ENPP5Q9UJA9 477 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 SPTBN1Q01082 2364 aaKnown RBP13.25□□□□□ -0.29
PRPF3-201ENST00000324862 USP9XQ93008 2570 aaPredicted RBP13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ARPC4-TTLL3A0A0A6YYG9 625 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 TBX1O43435 398 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 SOX2P48431 317 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 TAS2R43P59537 309 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
PRPF3-201ENST00000324862 BCL2L15Q5TBC7 163 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 SLC30A7Q8NEW0 376 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 OR51E1Q8TCB6 317 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 SPTSSAQ969W0 71 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 OR14A2Q96R54 314 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 ACOD1A6NK06 481 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 AIREO43918 545 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 IGKV3-15P01624 115 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 LCATP04180 440 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 EPXP11678 715 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 GABRA5P31644 462 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 WNT5AP41221 380 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 PLP2Q04941 152 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 C22orf42Q6IC83 251 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 FDX2Q6P4F2 183 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 SEZ6L2Q6UXD5 910 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 ANKRD13BQ86YJ7 626 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 ABHD4Q8TB40 342 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 BOD1Q96IK1 185 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 ELOVL5Q9NYP7 299 aa13.24□□□□□ -0.29
PRPF3-201ENST00000324862 IGHV1-18A0A0C4DH31 117 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 THBDP07204 575 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 CECR9P0C854 216 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 PSMA1P25786 263 aaKnown RBP13.23□□□□□ -0.29
PRPF3-201ENST00000324862 DCTDP32321 178 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 PPA1Q15181 289 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 ITLN2Q8WWU7 325 aaPredicted RBP13.23□□□□□ -0.29
PRPF3-201ENST00000324862 C12orf43Q96C57 262 aaKnown RBP13.23□□□□□ -0.29
PRPF3-201ENST00000324862 PGAM5Q96HS1 289 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 LYZL4Q96KX0 146 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
PRPF3-201ENST00000324862 SHISA3A0PJX4 238 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 H3BMQ9 156 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 GABRPO00591 440 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 ATE1O95260 518 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 FAM157BP0CG42 384 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 CBR1P16152 277 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 ASCL1P50553 236 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 TPTEP56180 551 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 ELMOD2Q8IZ81 293 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 LINC01560Q8TB33 94 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 WFIKKN1Q96NZ8 548 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 POFUT1Q9H488 388 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 BATF3Q9NR55 127 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 NUFIP1Q9UHK0 495 aaKnown RBP13.23□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF281Q9Y2X9 895 aa13.23□□□□□ -0.29
PRPF3-201ENST00000324862 UBR5O95071 2799 aaPredicted RBP13.22□□□□□ -0.29
PRPF3-201ENST00000324862 CADP27708 2225 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 M0R1B8 84 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 GABARAPO95166 117 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 APLNRP35414 380 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 ERVS71-1P61550 626 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 ECH1Q13011 328 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 SPCS2Q15005 226 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 SPATA46Q5T0L3 261 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 COMMD2Q86X83 199 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 WFDC8Q8IUA0 241 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 NDNFQ8TB73 568 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
PRPF3-201ENST00000324862 MYCBPQ99417 103 aaPredicted RBP13.22□□□□□ -0.29
PRPF3-201ENST00000324862 NIPAL2Q9H841 368 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 GPR84Q9NQS5 396 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 TXNL4BQ9NX01 149 aaKnown RBP13.22□□□□□ -0.29
PRPF3-201ENST00000324862 STUB1Q9UNE7 303 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 LOC107986453A0A1B0GWG9 222 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 TTKP33981 857 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 CCR9P51686 369 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 TFF3Q07654 80 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 GPR50Q13585 617 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 SLC25A35Q3KQZ1 300 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 ACSM3Q53FZ2 586 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 RFPL4BQ6ZWI9 263 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 STEAP2Q8NFT2 490 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms