RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OR10K2Q6IF99 312 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ZFP82Q8N141 532 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PLA2G12AQ9BZM1 189 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FLVCR1Q9Y5Y0 555 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 MYO10Q9HD67 2058 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PRSS36Q5K4E3 855 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF687Q8N1G0 1237 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 SLC22A13Q9Y226 551 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 OR2G3Q8NGZ4 309 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 OR4Q3Q8NH05 313 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 WDFY2Q96P53 400 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 TAAR9Q96RI9 348 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 MARF1Q9Y4F3 1742 aaKnown RBP11.56□□□□□ -0.56
PTCD1-201ENST00000292478 OR4E1P0C645 316 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 CTGFP29279 349 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 CLDN15P56746 228 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 ZDHHC23Q8IYP9 409 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 FYTTD1Q96QD9 318 aaKnown RBP11.56□□□□□ -0.56
PTCD1-201ENST00000292478 GABRG3Q99928 467 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 MMP25Q9NPA2 562 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 ARPC4-TTLL3A0A0A6YYG9 625 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 SERPINE3A8MV23 424 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 IL5P05113 134 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 ZIC1Q15915 447 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCD1-201ENST00000292478 TMEM217Q8N7C4 229 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 CYSLTR2Q9NS75 346 aa11.56□□□□□ -0.56
PTCD1-201ENST00000292478 E5RGE8 158 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 HS3ST1O14792 307 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ATF1P18846 271 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 TGFBR1P36897 503 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 FUT6P51993 359 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 IL11RAQ14626 422 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 PRICKLE4Q2TBC4 344 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 RHOUQ7L0Q8 258 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 LYG2Q86SG7 212 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 CORO2AQ92828 525 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 WNT16Q9UBV4 365 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF391Q9UJN7 358 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 NSG2Q9Y328 171 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF816-ZNF321PA0A0X1KG74 233 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 PRRG2O14669 202 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 IL2RAP01589 272 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 CCL7P80098 99 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 BAK1Q16611 211 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 FAM122CQ6P4D5 195 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 TCTE3Q8IZS6 198 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 KCNRGQ8N5I3 272 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 MED30Q96HR3 178 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 OR2A5Q96R48 311 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 GFOD1Q9NXC2 390 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 PLPP2O43688 288 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 METAP1P53582 386 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 TMEM215Q68D42 235 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 DEGS2Q6QHC5 323 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF808Q8N4W9 903 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 OR2AK2Q8NG84 335 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 C5orf49A4QMS7 147 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 OR5H14A6NHG9 310 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 NPIPB8E9PQR5 432 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 CCSO14618 274 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 IGHV3-9P01782 118 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 RPS2P15880 293 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 SNTB1Q13884 538 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 OR2W3Q7Z3T1 314 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 MFSD4AQ8N468 514 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF321PQ8N8H1 164 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 LINC01555Q8NAE3 123 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
PTCD1-201ENST00000292478 PURGQ9UJV8 347 aaKnown RBP11.55□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF121P58317 390 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 XAF1Q6GPH4 301 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 DLL4Q9NR61 685 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 DNAJB12Q9NXW2 375 aaKnown RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 TNFSF11O14788 317 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 MT-ND4LP03901 98 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 CD3DP04234 171 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 PCBP3P57721 371 aaKnown RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 BHLHE23Q8NDY6 225 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 GPR32P1Q8NGA4 272 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 EID2BQ96D98 161 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 TXN2Q99757 166 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 CCDC187A0A096LP49 1063 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 IGHA2P01877 340 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 FUT7Q11130 342 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 EDDM3AQ14507 147 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF141Q15928 474 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms