RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TSPAN15O95858 294 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF93P35789 620 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF141Q15928 474 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 SGCAQ16586 387 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 OR5D14Q8NGL3 314 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 RAB3CQ96E17 227 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 SVILO95425 2214 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 IGHV3-20A0A0C4DH32 117 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.48
SCAF4-201ENST00000286835 K7EQS6 105 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 MBTPS2O43462 519 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 IFNA21P01568 189 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 CPT2P23786 658 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 ADH6P28332 368 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 RAB13P51153 203 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 SNRPEP62304 92 aaKnown RBP12.02□□□□□ -0.48
SCAF4-201ENST00000286835 PLAURQ03405 335 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 INPP5JQ15735 1006 aaPredicted RBP12.02□□□□□ -0.48
SCAF4-201ENST00000286835 LPCAT3Q6P1A2 487 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 SLC16A13Q7RTY0 426 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.02□□□□□ -0.48
SCAF4-201ENST00000286835 TM4SF19Q96DZ7 209 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 SLC19A3Q9BZV2 496 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 SLCO5A1Q9H2Y9 848 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 NDRG3Q9UGV2 375 aa12.02□□□□□ -0.48
SCAF4-201ENST00000286835 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 AFF3P51826 1226 aaKnown RBP12.02□□□□□ -0.49
SCAF4-201ENST00000286835 EEF1A1P5Q5VTE0 462 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 GLIPR1L1Q6UWM5 242 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 PNLDC1Q8NA58 520 aaKnown RBP12.02□□□□□ -0.49
SCAF4-201ENST00000286835 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 OR4D6Q8NGJ1 314 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 ASB5Q8WWX0 329 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
SCAF4-201ENST00000286835 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 RPH3AQ9Y2J0 694 aaPredicted RBP12.02□□□□□ -0.49
SCAF4-201ENST00000286835 UNC80Q8N2C7 3258 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 IGKV1D-42A0A075B6H8 117 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 JMJD7P0C870 316 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 CLRN1P58418 232 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 FXYD4P59646 89 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 SERTAD2Q14140 314 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 VWA2Q5GFL6 755 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 C16orf47Q6ZP98 133 aaPredicted RBP12.02□□□□□ -0.49
SCAF4-201ENST00000286835 OR52N4Q8NGI2 321 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 SCPEP1Q9HB40 452 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 RAB22AQ9UL26 194 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 TNFSF18Q9UNG2 199 aa12.02□□□□□ -0.49
SCAF4-201ENST00000286835 OR6C76A6NM76 312 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SULT1C2O00338 296 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SPP1P10451 314 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 MYF5P13349 255 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SERPINA2P20848 420 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 CD1CP29017 333 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF117Q03924 483 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 GAB4Q2WGN9 574 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ADAM5Q6NVV9 412 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 JMJD6Q6NYC1 403 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ATG4DQ86TL0 474 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-201ENST00000286835 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 OR52N5Q8NH56 324 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF700Q9H0M5 742 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 TLNRD1Q9H1K6 362 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ZCCHC4Q9H5U6 513 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 LRP3O75074 770 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 HEXBP07686 556 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 CD27P26842 260 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 APOC1P02654 83 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 FBLP22087 321 aaKnown RBP12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SFTPDP35247 375 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SLC6A8P48029 635 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 OR2B8PP59922 312 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 PRTGQ2VWP7 1150 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 RNF128Q8TEB7 428 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 PTGES2Q9H7Z7 377 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 RHOFQ9HBH0 211 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 EXOSC3Q9NQT5 275 aaKnown RBP12.01□□□□□ -0.49
SCAF4-201ENST00000286835 ZFP57Q9NU63 452 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 MRPS28Q9Y2Q9 187 aaKnown RBP12.01□□□□□ -0.49
SCAF4-201ENST00000286835 PLXNA2O75051 1894 aa12.01□□□□□ -0.49
SCAF4-201ENST00000286835 SHISA8B8ZZ34 492 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 F5H5K5 113 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 PET100P0DJ07 73 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 SMIM10L1P0DMW3 83 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 GFERP55789 205 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 FOXL2P58012 376 aa12□□□□□ -0.49
SCAF4-201ENST00000286835 TMEM164Q5U3C3 297 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms