RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OR2T35Q8NGX2 323 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 OR6N1Q8NGY5 312 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 COQ8AQ8NI60 647 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 ZNF837Q96EG3 531 aaPredicted RBP12.03□□□□□ -0.48
VMP1-201ENST00000262291 LIN37Q96GY3 246 aaPredicted RBP12.03□□□□□ -0.48
VMP1-201ENST00000262291 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
VMP1-201ENST00000262291 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
VMP1-201ENST00000262291 CCDC187A0A096LP49 1063 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 SPAARA0A1B0GVQ0 90 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 CBR3O75828 277 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 APOC3P02656 99 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 SERPINA7P05543 415 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 ITGA5P08648 1049 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 ADH6P28332 368 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 SLC6A1P30531 599 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 CYB561P49447 251 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.48
VMP1-201ENST00000262291 THEM4Q5T1C6 240 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 PHYHIPQ92561 330 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 CHIAQ9BZP6 476 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 GHITMQ9H3K2 345 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 CFAP47Q6ZTR5 3102 aa12.02□□□□□ -0.48
VMP1-201ENST00000262291 MFSD2BA6NFX1 497 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 SRSF10O75494 262 aaKnown RBP12.02□□□□□ -0.49
VMP1-201ENST00000262291 CELA3AP09093 270 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 CDK2P24941 298 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 GDF1P27539 372 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 CD96P40200 585 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 CCR6P51684 374 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.49
VMP1-201ENST00000262291 ZNF169Q14929 603 aaPredicted RBP12.02□□□□□ -0.49
VMP1-201ENST00000262291 DEFB124Q8NES8 71 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 LRFN1Q9P244 771 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 FAM186AA6NE01 2351 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 A0A087WZY1 265 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 C5orf63A6NC05 138 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 UBL3O95164 117 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 DHFRP00374 187 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 GLAP06280 429 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 LPLP06858 475 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 TRIP6Q15654 476 aaKnown RBP12.02□□□□□ -0.49
VMP1-201ENST00000262291 FAM209BQ5JX69 171 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 OR10K2Q6IF99 312 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 FAAP20Q6NZ36 180 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 FDX2Q6P4F2 183 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 SLC25A47Q6Q0C1 308 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 BIVMQ86UB2 503 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 COMMD2Q86X83 199 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 OR52I2Q8NH67 350 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 OR6X1Q8NH79 312 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 HAVCR2Q8TDQ0 301 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 RNF133Q8WVZ7 376 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 SGCZQ96LD1 299 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 SFXN2Q96NB2 322 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 ZPBPQ9BS86 351 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 RBM24Q9BX46 236 aaKnown RBP12.02□□□□□ -0.49
VMP1-201ENST00000262291 LDAHQ9H6V9 325 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 KLHL9Q9P2J3 617 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 KLK11Q9UBX7 282 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 CACNG2Q9Y698 323 aa12.02□□□□□ -0.49
VMP1-201ENST00000262291 ZNF407Q9C0G0 2248 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
VMP1-201ENST00000262291 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 CXCL13O43927 109 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 KDM4BO94953 1096 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 RAB3AP20336 220 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 PTBP1P26599 531 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■■ 42.5
VMP1-201ENST00000262291 CCR9P51686 369 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 SRYQ05066 204 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
VMP1-201ENST00000262291 TAF13Q15543 124 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 PLA1AQ53H76 456 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 TOMM5Q8N4H5 51 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 OR2AJ1Q8NGZ0 328 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 FGGYQ96C11 551 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 C1orf198Q9H425 327 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 FAM86C1Q9NVL1 165 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 DNAJC13O75165 2243 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 FAM166BA8MTA8 275 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 SSNA1O43805 119 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 AQP8O94778 261 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 ZNF432O94892 652 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 GIFP27352 417 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 NTF4P34130 210 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 BTCP35070 178 aa12.01□□□□□ -0.49
VMP1-201ENST00000262291 H3F3AP84243 136 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms