RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
SGCA-201ENST00000262018 SYT14Q8NB59 555 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 OR10H5Q8NGA6 315 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 OTOSQ8NHW6 89 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 MCFD2Q8NI22 146 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 RPS4Y2Q8TD47 263 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 RBP7Q96R05 134 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 EMC6Q9BV81 110 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
SGCA-201ENST00000262018 SRXN1Q9BYN0 137 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 TTTY10Q9BZA0 68 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 KCNS2Q9ULS6 477 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 GSTK1Q9Y2Q3 226 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 IGKV1D-43A0A0B4J1Z2 117 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ZNF593O00488 134 aaPredicted RBP11.57□□□□□ -0.56
SGCA-201ENST00000262018 GABRPO00591 440 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 MAGEB4O15481 346 aaPredicted RBP11.57□□□□□ -0.56
SGCA-201ENST00000262018 TCF21O43680 179 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 SULT1C4O75897 302 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 RGS9O75916 674 aaPredicted RBP11.57□□□□□ -0.56
SGCA-201ENST00000262018 IL1AP01583 271 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 TACSTD2P09758 323 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 PSKH1P11801 424 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 HNF1AP20823 631 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ETV6P41212 452 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 CLRN1P58418 232 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 FMODQ06828 376 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 EGR3Q06889 387 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
SGCA-201ENST00000262018 SLC17A1Q14916 467 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 CDK5R1Q15078 307 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 HIST3H3Q16695 136 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 PCK2Q16822 640 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 RGS21Q2M5E4 152 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 C11orf91Q3C1V1 193 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 TEX30Q5JUR7 227 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 C22orf42Q6IC83 251 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ARL9Q6T311 187 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 STAC2Q6ZMT1 411 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 CREB3L2Q70SY1 520 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 DPY19L4Q7Z388 723 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 SLC26A10Q8NG04 563 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 OR9K2Q8NGE7 335 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ASB17Q8WXJ9 295 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 AP3S1Q92572 193 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 PGLYRP3Q96LB9 341 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 KCTD7Q96MP8 289 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 TMED9Q9BVK6 235 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 PRRG4Q9BZD6 226 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ACTR6Q9GZN1 396 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 KLHL9Q9P2J3 617 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
SGCA-201ENST00000262018 GNG8Q9UK08 70 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 GRIP1Q9Y3R0 1128 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
SGCA-201ENST00000262018 YLPM1P49750 1951 aaKnown RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 SVEP1Q4LDE5 3571 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 ARPC4-TTLL3A0A0A6YYG9 625 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 SMAD9O15198 467 aaKnown RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 ABHD16AO95870 558 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 HLA-DQA2P01906 255 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 ENPP1P22413 925 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 RPS19P39019 145 aaKnown RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 PPP5CP53041 499 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 CLDN17P56750 224 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 CAMK2DQ13557 499 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 MALRD1Q5VYJ5 2156 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 SLC25A47Q6Q0C1 308 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 TMEM91Q6ZNR0 172 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 FAM220AQ7Z4H9 259 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 SMIM19Q96E16 107 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 FOXN4Q96NZ1 517 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 DCLRE1CQ96SD1 692 aaKnown RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 TRAF4Q9BUZ4 470 aaPredicted RBP11.56□□□□□ -0.56
SGCA-201ENST00000262018 CDADC1Q9BWV3 514 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 KCNG2Q9UJ96 466 aa11.56□□□□□ -0.56
SGCA-201ENST00000262018 IGHV3-15A0A0B4J1V0 119 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 UPK3AO75631 287 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 AQP8O94778 261 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 KRT8P05787 483 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 CD3EP07766 207 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 OR8G3PP0DMU2 310 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 NR2C1P13056 603 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 EDNRAP25101 427 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 RORCP51449 518 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
SGCA-201ENST00000262018 DSCR9P59020 149 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 SLC3A1Q07837 685 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 ZNF181Q2M3W8 571 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
SGCA-201ENST00000262018 ABLIM2Q6H8Q1 611 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 FAM166AQ6J272 317 aa11.55□□□□□ -0.56
SGCA-201ENST00000262018 SLC18B1Q6NT16 456 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms