RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 HRH4Q9H3N8 390 aa13.84□□□□□ -0.19
DDX55-201ENST00000238146 PTGES2Q9H7Z7 377 aa13.84□□□□□ -0.19
DDX55-201ENST00000238146 REV3LO60673 3130 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 NPIPB7O75200 414 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 FARS2O95363 451 aaKnown RBP13.83□□□□□ -0.2
DDX55-201ENST00000238146 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.2
DDX55-201ENST00000238146 CRABP1P29762 137 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 GALNSP34059 522 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 TMEM128Q5BJH2 165 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 PTCRAQ6ISU1 281 aaPredicted RBP13.83□□□□□ -0.2
DDX55-201ENST00000238146 OR2I1PQ8NGU4 316 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 SLC46A1Q96NT5 459 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 MICU1Q9BPX6 476 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 NRSN2Q9GZP1 204 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 OR5AC2Q9NZP5 309 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 CDC14CA4D256 554 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 PLPP3O14495 311 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 ADAP1O75689 374 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 IFNA4P05014 189 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 HLA-DOBP13765 273 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 TBPP20226 339 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 HSD11B1P28845 292 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 SLC6A9P48067 706 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 TAS2R31P59538 309 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 KDM8Q8N371 416 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 OR4K15Q8NH41 348 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 MRGPRX1Q96LB2 322 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 FBRSQ9HAH7 460 aa13.83□□□□□ -0.2
DDX55-201ENST00000238146 PCNX3Q9H6A9 2034 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 FRG2CA6NGY1 282 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 BPNT1O95861 308 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 GP1BBP13224 206 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 ZNF823P16415 610 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 GNALP38405 381 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 TERB2Q8NHR7 220 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 ADIPOR1Q96A54 375 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 GAL3ST4Q96RP7 486 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 TMED7-TICAM2A0A0A6YYA0 188 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 EIF3GO75821 320 aaKnown RBP eCLIP13.82□□□□□ -0.2
DDX55-201ENST00000238146 IGHMP01871 453 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 CAV2P51636 162 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 FMODQ06828 376 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 C1orf61Q13536 156 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 C1orf140Q5VVS0 124 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 PRSS54Q6PEW0 395 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 BADQ92934 168 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
DDX55-201ENST00000238146 ADAT3Q96EY9 351 aaPredicted RBP13.82□□□□□ -0.2
DDX55-201ENST00000238146 SMIM8Q96KF7 97 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 MAP3K3Q99759 626 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 OR11A1Q9GZK7 315 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 PRR13Q9NZ81 148 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 GPR132Q9UNW8 380 aa13.82□□□□□ -0.2
DDX55-201ENST00000238146 COLCA2A8K830 154 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 ZNF217O75362 1048 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 LYL1P12980 280 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 PGCP20142 388 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 AKT2P31751 481 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 SLC22A24Q8N4F4 322 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 NICN1Q9BSH3 213 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 PDE7BQ9NP56 450 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 FANCFQ9NPI8 374 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 SLC5A6Q9Y289 635 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 LRP4O75096 1905 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 ACAA1P09110 424 aaPredicted RBP13.81□□□□□ -0.2
DDX55-201ENST00000238146 PTGFRP43088 359 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 SLC9A3R2Q15599 337 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 PCK2Q16822 640 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 AWAT2Q6E213 333 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 CLEC18BQ6UXF7 455 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 TMEM151BQ8IW70 566 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 SAT2Q96F10 170 aaPredicted RBP13.81□□□□□ -0.2
DDX55-201ENST00000238146 AQP10Q96PS8 301 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 UQCC2Q9BRT2 126 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 TRANK1O15050 2925 aa13.81□□□□□ -0.2
DDX55-201ENST00000238146 KIAA0100Q14667 2235 aaKnown RBP13.81□□□□□ -0.2
DDX55-201ENST00000238146 CPAMD8Q8IZJ3 1885 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 A8MVM7 634 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 MBTPS2O43462 519 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 NPY4RP50391 375 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 SLC26A5P58743 744 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 PEA15Q15121 130 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
DDX55-201ENST00000238146 RNF144BQ7Z419 303 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 CRB3Q9BUF7 120 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 RAB18Q9NP72 206 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 VCANP13611 3396 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 IGKV1D-43A0A0B4J1Z2 117 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 TMEM14DPA8MWL7 114 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms