RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ALX3O95076 343 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CT45A10P0DMU9 189 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ANKRD34AQ69YU3 496 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TMEM179BQ7Z7N9 219 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ZNF321PQ8N8H1 164 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ZPBPQ9BS86 351 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TRAV1-2A0A0B4J238 106 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 GLI4P10075 376 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OPRM1P35372 400 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 CSN1S1P47710 185 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 GFERP55789 205 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 CLDN15P56746 228 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 TLE1Q04724 770 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-201ENST00000215793 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 EXD3Q8N9H8 876 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR10Z1Q8NGY1 313 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 C14orf79Q96F83 325 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 REEP6Q96HR9 211 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 B9D1Q9UPM9 204 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 LOXL2Q9Y4K0 774 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 A0A0A6YYD5 115 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 ABCD4O14678 606 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-201ENST00000215793 CD3DP04234 171 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 RPL12P30050 165 aaKnown RBP12.28□□□□□ -0.44
SF3A1-201ENST00000215793 RPS27P42677 84 aaKnown RBP12.28□□□□□ -0.44
SF3A1-201ENST00000215793 RAD52P43351 418 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 CLDN20P56880 219 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 TAGLNQ01995 201 aaKnown RBP12.28□□□□□ -0.44
SF3A1-201ENST00000215793 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 ZNF718Q3SXZ3 478 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 TMEM268Q5VZI3 342 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 SPACA5Q96QH8 159 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 MBP02144 154 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR4E1P0C645 316 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 FXNQ16595 210 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 ZDHHC23Q8IYP9 409 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 MFSD4AQ8N468 514 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR2AK2Q8NG84 335 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 C1QTNF6Q9BXI9 259 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 RAB27BO00194 218 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 ICMTO60725 284 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 PDZK1IP1Q13113 114 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 BATF2Q8N1L9 274 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR1N1Q8NGS0 311 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 OR8U1Q8NH10 309 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
SF3A1-201ENST00000215793 A0A0A6YYJ9 748 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 SIRPB1O00241 398 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 MAGEB4O15481 346 aaPredicted RBP12.27□□□□□ -0.44
SF3A1-201ENST00000215793 OR10A3P58181 314 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 ZNF239Q16600 458 aaKnown RBP12.27□□□□□ -0.44
SF3A1-201ENST00000215793 ADGRG3Q86Y34 549 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 PTDSS2Q9BVG9 487 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 GDF2Q9UK05 429 aaPredicted RBP12.27□□□□□ -0.44
SF3A1-201ENST00000215793 EMDP50402 254 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 DHODHQ02127 395 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 CCDC71Q8IV32 467 aaPredicted RBP12.27□□□□□ -0.44
SF3A1-201ENST00000215793 BAP18Q8IXM2 172 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 NKX6-2Q9C056 277 aaPredicted RBP12.27□□□□□ -0.44
SF3A1-201ENST00000215793 OPA3Q9H6K4 179 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 PPP1R3CQ9UQK1 317 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.44
SF3A1-201ENST00000215793 EPXP11678 715 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 CCR2P41597 374 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 DUSP2Q05923 314 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ELFN2Q5R3F8 820 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 PP6455Q8WZ26 134 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 LTB4R2Q9NPC1 389 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ATP6V1G2-DDX39BF2Z307 99 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF354AO60765 605 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-201ENST00000215793 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-201ENST00000215793 CD80P33681 288 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 DBX2Q6ZNG2 339 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 SLC25A26Q70HW3 274 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 FAM58AQ8N1B3 248 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 LHX4Q969G2 390 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 SPACA9Q96E40 222 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-201ENST00000215793 C2orf50Q96LR7 162 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 TECTBQ96PL2 329 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-201ENST00000215793 RNF32Q9H0A6 362 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 ATP23Q9Y6H3 246 aa12.27□□□□□ -0.45
SF3A1-201ENST00000215793 A0A096LPE4 126 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 METTL12A8MUP2 240 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 C4AP0C0L4 1744 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 HRH1P35367 487 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms